Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16962 | 51109;51110;51111 | chr2:178611245;178611244;178611243 | chr2:179475972;179475971;179475970 |
N2AB | 15321 | 46186;46187;46188 | chr2:178611245;178611244;178611243 | chr2:179475972;179475971;179475970 |
N2A | 14394 | 43405;43406;43407 | chr2:178611245;178611244;178611243 | chr2:179475972;179475971;179475970 |
N2B | 7897 | 23914;23915;23916 | chr2:178611245;178611244;178611243 | chr2:179475972;179475971;179475970 |
Novex-1 | 8022 | 24289;24290;24291 | chr2:178611245;178611244;178611243 | chr2:179475972;179475971;179475970 |
Novex-2 | 8089 | 24490;24491;24492 | chr2:178611245;178611244;178611243 | chr2:179475972;179475971;179475970 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/R | None | None | 0.002 | N | 0.126 | 0.174 | 0.277730125212 | gnomAD-4.0.0 | 2.05429E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.69965E-06 | 0 | 0 |
H/Y | None | None | 0.917 | N | 0.283 | 0.204 | 0.365317461125 | gnomAD-4.0.0 | 3.18884E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 1.88587E-05 | 0 | 2.86256E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/A | 0.1564 | likely_benign | 0.1524 | benign | 0.389 | Stabilizing | 0.176 | N | 0.245 | neutral | None | None | None | None | N |
H/C | 0.1587 | likely_benign | 0.163 | benign | 0.739 | Stabilizing | 0.995 | D | 0.299 | neutral | None | None | None | None | N |
H/D | 0.1266 | likely_benign | 0.124 | benign | 0.168 | Stabilizing | 0.642 | D | 0.341 | neutral | N | 0.423746512 | None | None | N |
H/E | 0.1555 | likely_benign | 0.1527 | benign | 0.193 | Stabilizing | 0.329 | N | 0.193 | neutral | None | None | None | None | N |
H/F | 0.3652 | ambiguous | 0.3683 | ambiguous | 1.034 | Stabilizing | 0.704 | D | 0.392 | neutral | None | None | None | None | N |
H/G | 0.1749 | likely_benign | 0.1725 | benign | 0.113 | Stabilizing | 0.495 | N | 0.29 | neutral | None | None | None | None | N |
H/I | 0.3035 | likely_benign | 0.31 | benign | 1.088 | Stabilizing | 0.543 | D | 0.39 | neutral | None | None | None | None | N |
H/K | 0.1129 | likely_benign | 0.1201 | benign | 0.399 | Stabilizing | 0.013 | N | 0.12 | neutral | None | None | None | None | N |
H/L | 0.1181 | likely_benign | 0.1168 | benign | 1.088 | Stabilizing | 0.001 | N | 0.143 | neutral | N | 0.466000906 | None | None | N |
H/M | 0.3236 | likely_benign | 0.3353 | benign | 0.805 | Stabilizing | 0.893 | D | 0.314 | neutral | None | None | None | None | N |
H/N | 0.0695 | likely_benign | 0.0708 | benign | 0.379 | Stabilizing | 0.425 | N | 0.253 | neutral | N | 0.428355555 | None | None | N |
H/P | 0.1236 | likely_benign | 0.1127 | benign | 0.881 | Stabilizing | 0.784 | D | 0.412 | neutral | N | 0.465614651 | None | None | N |
H/Q | 0.092 | likely_benign | 0.096 | benign | 0.472 | Stabilizing | 0.023 | N | 0.133 | neutral | N | 0.383724495 | None | None | N |
H/R | 0.0665 | likely_benign | 0.0676 | benign | -0.152 | Destabilizing | 0.002 | N | 0.126 | neutral | N | 0.409185689 | None | None | N |
H/S | 0.1288 | likely_benign | 0.131 | benign | 0.423 | Stabilizing | 0.329 | N | 0.273 | neutral | None | None | None | None | N |
H/T | 0.1381 | likely_benign | 0.138 | benign | 0.549 | Stabilizing | 0.013 | N | 0.131 | neutral | None | None | None | None | N |
H/V | 0.2057 | likely_benign | 0.2098 | benign | 0.881 | Stabilizing | 0.329 | N | 0.341 | neutral | None | None | None | None | N |
H/W | 0.3733 | ambiguous | 0.3828 | ambiguous | 1.021 | Stabilizing | 0.995 | D | 0.291 | neutral | None | None | None | None | N |
H/Y | 0.1211 | likely_benign | 0.122 | benign | 1.312 | Stabilizing | 0.917 | D | 0.283 | neutral | N | 0.510569004 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.