Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16963 | 51112;51113;51114 | chr2:178611242;178611241;178611240 | chr2:179475969;179475968;179475967 |
N2AB | 15322 | 46189;46190;46191 | chr2:178611242;178611241;178611240 | chr2:179475969;179475968;179475967 |
N2A | 14395 | 43408;43409;43410 | chr2:178611242;178611241;178611240 | chr2:179475969;179475968;179475967 |
N2B | 7898 | 23917;23918;23919 | chr2:178611242;178611241;178611240 | chr2:179475969;179475968;179475967 |
Novex-1 | 8023 | 24292;24293;24294 | chr2:178611242;178611241;178611240 | chr2:179475969;179475968;179475967 |
Novex-2 | 8090 | 24493;24494;24495 | chr2:178611242;178611241;178611240 | chr2:179475969;179475968;179475967 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/E | None | None | 1.0 | N | 0.406 | 0.246 | 0.19670166235 | gnomAD-4.0.0 | 2.05424E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.69964E-06 | 0 | 0 |
D/N | rs760115243 | -0.592 | 1.0 | N | 0.617 | 0.362 | 0.259761712551 | gnomAD-2.1.1 | 4.05E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
D/N | rs760115243 | -0.592 | 1.0 | N | 0.617 | 0.362 | 0.259761712551 | gnomAD-4.0.0 | 1.36954E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 2.32089E-05 | 0 |
D/V | rs775055815 | 0.257 | 1.0 | D | 0.693 | 0.591 | 0.411133732114 | gnomAD-2.1.1 | 4.04E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 3.27354E-04 | None | 0 | 0 | 0 |
D/V | rs775055815 | 0.257 | 1.0 | D | 0.693 | 0.591 | 0.411133732114 | gnomAD-3.1.2 | 1.32E-05 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 4.14422E-04 | 0 |
D/V | rs775055815 | 0.257 | 1.0 | D | 0.693 | 0.591 | 0.411133732114 | gnomAD-4.0.0 | 1.30245E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 2.30713E-04 | 0 |
D/Y | rs760115243 | -0.064 | 1.0 | D | 0.645 | 0.538 | 0.396794106654 | gnomAD-2.1.1 | 4.05E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 3.27354E-04 | None | 0 | 0 | 0 |
D/Y | rs760115243 | -0.064 | 1.0 | D | 0.645 | 0.538 | 0.396794106654 | gnomAD-3.1.2 | 1.32E-05 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 4.14766E-04 | 0 |
D/Y | rs760115243 | -0.064 | 1.0 | D | 0.645 | 0.538 | 0.396794106654 | gnomAD-4.0.0 | 1.36453E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 2.30784E-04 | 1.60339E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.495 | ambiguous | 0.5078 | ambiguous | -0.398 | Destabilizing | 1.0 | D | 0.69 | prob.neutral | D | 0.522977177 | None | None | I |
D/C | 0.8667 | likely_pathogenic | 0.8742 | pathogenic | -0.168 | Destabilizing | 1.0 | D | 0.666 | neutral | None | None | None | None | I |
D/E | 0.3327 | likely_benign | 0.3356 | benign | -0.474 | Destabilizing | 1.0 | D | 0.406 | neutral | N | 0.452627178 | None | None | I |
D/F | 0.8928 | likely_pathogenic | 0.901 | pathogenic | -0.113 | Destabilizing | 1.0 | D | 0.655 | neutral | None | None | None | None | I |
D/G | 0.4145 | ambiguous | 0.4174 | ambiguous | -0.681 | Destabilizing | 1.0 | D | 0.701 | prob.neutral | N | 0.444799208 | None | None | I |
D/H | 0.5411 | ambiguous | 0.5362 | ambiguous | -0.261 | Destabilizing | 1.0 | D | 0.635 | neutral | D | 0.524849289 | None | None | I |
D/I | 0.7836 | likely_pathogenic | 0.8022 | pathogenic | 0.324 | Stabilizing | 1.0 | D | 0.674 | neutral | None | None | None | None | I |
D/K | 0.7198 | likely_pathogenic | 0.7319 | pathogenic | -0.195 | Destabilizing | 1.0 | D | 0.72 | prob.delet. | None | None | None | None | I |
D/L | 0.7951 | likely_pathogenic | 0.807 | pathogenic | 0.324 | Stabilizing | 1.0 | D | 0.692 | prob.neutral | None | None | None | None | I |
D/M | 0.8926 | likely_pathogenic | 0.9011 | pathogenic | 0.559 | Stabilizing | 1.0 | D | 0.665 | neutral | None | None | None | None | I |
D/N | 0.1442 | likely_benign | 0.1464 | benign | -0.534 | Destabilizing | 1.0 | D | 0.617 | neutral | N | 0.450500423 | None | None | I |
D/P | 0.9137 | likely_pathogenic | 0.9333 | pathogenic | 0.108 | Stabilizing | 1.0 | D | 0.695 | prob.neutral | None | None | None | None | I |
D/Q | 0.63 | likely_pathogenic | 0.6379 | pathogenic | -0.432 | Destabilizing | 1.0 | D | 0.667 | neutral | None | None | None | None | I |
D/R | 0.7449 | likely_pathogenic | 0.7536 | pathogenic | 0.01 | Stabilizing | 1.0 | D | 0.665 | neutral | None | None | None | None | I |
D/S | 0.2554 | likely_benign | 0.2675 | benign | -0.7 | Destabilizing | 1.0 | D | 0.639 | neutral | None | None | None | None | I |
D/T | 0.5114 | ambiguous | 0.5191 | ambiguous | -0.478 | Destabilizing | 1.0 | D | 0.727 | prob.delet. | None | None | None | None | I |
D/V | 0.605 | likely_pathogenic | 0.6165 | pathogenic | 0.108 | Stabilizing | 1.0 | D | 0.693 | prob.neutral | D | 0.595551048 | None | None | I |
D/W | 0.9723 | likely_pathogenic | 0.9754 | pathogenic | 0.043 | Stabilizing | 1.0 | D | 0.667 | neutral | None | None | None | None | I |
D/Y | 0.5534 | ambiguous | 0.5685 | pathogenic | 0.105 | Stabilizing | 1.0 | D | 0.645 | neutral | D | 0.574412569 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.