Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16970 | 51133;51134;51135 | chr2:178611221;178611220;178611219 | chr2:179475948;179475947;179475946 |
N2AB | 15329 | 46210;46211;46212 | chr2:178611221;178611220;178611219 | chr2:179475948;179475947;179475946 |
N2A | 14402 | 43429;43430;43431 | chr2:178611221;178611220;178611219 | chr2:179475948;179475947;179475946 |
N2B | 7905 | 23938;23939;23940 | chr2:178611221;178611220;178611219 | chr2:179475948;179475947;179475946 |
Novex-1 | 8030 | 24313;24314;24315 | chr2:178611221;178611220;178611219 | chr2:179475948;179475947;179475946 |
Novex-2 | 8097 | 24514;24515;24516 | chr2:178611221;178611220;178611219 | chr2:179475948;179475947;179475946 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs1351961700 | 0.049 | 0.955 | N | 0.459 | 0.259 | 0.208000267992 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.93E-06 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.324 | likely_benign | 0.3047 | benign | -0.78 | Destabilizing | 0.977 | D | 0.556 | neutral | N | 0.451140341 | None | None | I |
E/C | 0.9144 | likely_pathogenic | 0.8986 | pathogenic | -0.216 | Destabilizing | 1.0 | D | 0.761 | deleterious | None | None | None | None | I |
E/D | 0.1899 | likely_benign | 0.1839 | benign | -0.553 | Destabilizing | 0.977 | D | 0.394 | neutral | N | 0.455790457 | None | None | I |
E/F | 0.9094 | likely_pathogenic | 0.8973 | pathogenic | -0.554 | Destabilizing | 1.0 | D | 0.753 | deleterious | None | None | None | None | I |
E/G | 0.2451 | likely_benign | 0.2282 | benign | -1.012 | Destabilizing | 0.993 | D | 0.668 | neutral | N | 0.450144372 | None | None | I |
E/H | 0.6575 | likely_pathogenic | 0.6009 | pathogenic | -0.488 | Destabilizing | 0.999 | D | 0.693 | prob.neutral | None | None | None | None | I |
E/I | 0.6998 | likely_pathogenic | 0.6787 | pathogenic | -0.184 | Destabilizing | 0.998 | D | 0.768 | deleterious | None | None | None | None | I |
E/K | 0.2294 | likely_benign | 0.2005 | benign | 0.051 | Stabilizing | 0.955 | D | 0.459 | neutral | N | 0.460284237 | None | None | I |
E/L | 0.6994 | likely_pathogenic | 0.6593 | pathogenic | -0.184 | Destabilizing | 0.995 | D | 0.737 | prob.delet. | None | None | None | None | I |
E/M | 0.6697 | likely_pathogenic | 0.631 | pathogenic | 0.092 | Stabilizing | 0.999 | D | 0.717 | prob.delet. | None | None | None | None | I |
E/N | 0.3106 | likely_benign | 0.2886 | benign | -0.365 | Destabilizing | 0.995 | D | 0.7 | prob.neutral | None | None | None | None | I |
E/P | 0.9708 | likely_pathogenic | 0.959 | pathogenic | -0.363 | Destabilizing | 0.998 | D | 0.715 | prob.delet. | None | None | None | None | I |
E/Q | 0.1634 | likely_benign | 0.1481 | benign | -0.322 | Destabilizing | 0.568 | D | 0.301 | neutral | N | 0.457218846 | None | None | I |
E/R | 0.3991 | ambiguous | 0.3524 | ambiguous | 0.249 | Stabilizing | 0.99 | D | 0.703 | prob.neutral | None | None | None | None | I |
E/S | 0.2962 | likely_benign | 0.2848 | benign | -0.536 | Destabilizing | 0.983 | D | 0.573 | neutral | None | None | None | None | I |
E/T | 0.4123 | ambiguous | 0.3879 | ambiguous | -0.343 | Destabilizing | 0.995 | D | 0.688 | prob.neutral | None | None | None | None | I |
E/V | 0.4756 | ambiguous | 0.451 | ambiguous | -0.363 | Destabilizing | 0.997 | D | 0.735 | prob.delet. | D | 0.576775995 | None | None | I |
E/W | 0.9618 | likely_pathogenic | 0.9545 | pathogenic | -0.318 | Destabilizing | 1.0 | D | 0.764 | deleterious | None | None | None | None | I |
E/Y | 0.8262 | likely_pathogenic | 0.8036 | pathogenic | -0.301 | Destabilizing | 0.999 | D | 0.754 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.