Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16973 | 51142;51143;51144 | chr2:178611212;178611211;178611210 | chr2:179475939;179475938;179475937 |
N2AB | 15332 | 46219;46220;46221 | chr2:178611212;178611211;178611210 | chr2:179475939;179475938;179475937 |
N2A | 14405 | 43438;43439;43440 | chr2:178611212;178611211;178611210 | chr2:179475939;179475938;179475937 |
N2B | 7908 | 23947;23948;23949 | chr2:178611212;178611211;178611210 | chr2:179475939;179475938;179475937 |
Novex-1 | 8033 | 24322;24323;24324 | chr2:178611212;178611211;178611210 | chr2:179475939;179475938;179475937 |
Novex-2 | 8100 | 24523;24524;24525 | chr2:178611212;178611211;178611210 | chr2:179475939;179475938;179475937 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/G | rs943563172 | None | 0.012 | N | 0.501 | 0.063 | 0.117506650769 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 0 |
S/N | None | None | None | N | 0.283 | 0.035 | 0.0551355673512 | gnomAD-4.0.0 | 6.84671E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 1.65859E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0856 | likely_benign | 0.0835 | benign | -0.367 | Destabilizing | 0.016 | N | 0.46 | neutral | None | None | None | None | N |
S/C | 0.0878 | likely_benign | 0.0812 | benign | -0.407 | Destabilizing | 0.828 | D | 0.548 | neutral | N | 0.453019841 | None | None | N |
S/D | 0.2631 | likely_benign | 0.2127 | benign | 0.037 | Stabilizing | 0.038 | N | 0.499 | neutral | None | None | None | None | N |
S/E | 0.3335 | likely_benign | 0.275 | benign | 0.067 | Stabilizing | 0.016 | N | 0.498 | neutral | None | None | None | None | N |
S/F | 0.1785 | likely_benign | 0.1655 | benign | -0.503 | Destabilizing | 0.356 | N | 0.577 | neutral | None | None | None | None | N |
S/G | 0.112 | likely_benign | 0.1007 | benign | -0.636 | Destabilizing | 0.012 | N | 0.501 | neutral | N | 0.449232792 | None | None | N |
S/H | 0.1599 | likely_benign | 0.1372 | benign | -1.037 | Destabilizing | None | N | 0.329 | neutral | None | None | None | None | N |
S/I | 0.1013 | likely_benign | 0.0947 | benign | 0.237 | Stabilizing | 0.171 | N | 0.592 | neutral | N | 0.43071254 | None | None | N |
S/K | 0.3832 | ambiguous | 0.3157 | benign | -0.52 | Destabilizing | 0.016 | N | 0.506 | neutral | None | None | None | None | N |
S/L | 0.1019 | likely_benign | 0.1 | benign | 0.237 | Stabilizing | 0.038 | N | 0.532 | neutral | None | None | None | None | N |
S/M | 0.1579 | likely_benign | 0.1506 | benign | 0.125 | Stabilizing | 0.628 | D | 0.567 | neutral | None | None | None | None | N |
S/N | 0.0806 | likely_benign | 0.0776 | benign | -0.576 | Destabilizing | None | N | 0.283 | neutral | N | 0.416117381 | None | None | N |
S/P | 0.6491 | likely_pathogenic | 0.602 | pathogenic | 0.072 | Stabilizing | 0.356 | N | 0.592 | neutral | None | None | None | None | N |
S/Q | 0.284 | likely_benign | 0.2371 | benign | -0.569 | Destabilizing | 0.072 | N | 0.515 | neutral | None | None | None | None | N |
S/R | 0.3112 | likely_benign | 0.2328 | benign | -0.524 | Destabilizing | None | N | 0.379 | neutral | N | 0.40138121 | None | None | N |
S/T | 0.0679 | likely_benign | 0.0669 | benign | -0.52 | Destabilizing | 0.001 | N | 0.265 | neutral | N | 0.406868714 | None | None | N |
S/V | 0.1272 | likely_benign | 0.116 | benign | 0.072 | Stabilizing | 0.038 | N | 0.545 | neutral | None | None | None | None | N |
S/W | 0.2809 | likely_benign | 0.2379 | benign | -0.606 | Destabilizing | 0.864 | D | 0.593 | neutral | None | None | None | None | N |
S/Y | 0.1401 | likely_benign | 0.1316 | benign | -0.27 | Destabilizing | 0.214 | N | 0.591 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.