Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16975 | 51148;51149;51150 | chr2:178611206;178611205;178611204 | chr2:179475933;179475932;179475931 |
N2AB | 15334 | 46225;46226;46227 | chr2:178611206;178611205;178611204 | chr2:179475933;179475932;179475931 |
N2A | 14407 | 43444;43445;43446 | chr2:178611206;178611205;178611204 | chr2:179475933;179475932;179475931 |
N2B | 7910 | 23953;23954;23955 | chr2:178611206;178611205;178611204 | chr2:179475933;179475932;179475931 |
Novex-1 | 8035 | 24328;24329;24330 | chr2:178611206;178611205;178611204 | chr2:179475933;179475932;179475931 |
Novex-2 | 8102 | 24529;24530;24531 | chr2:178611206;178611205;178611204 | chr2:179475933;179475932;179475931 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/S | None | None | 0.322 | N | 0.372 | 0.147 | 0.267299060538 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.0887 | likely_benign | 0.086 | benign | -1.292 | Destabilizing | 0.885 | D | 0.51 | neutral | N | 0.506495901 | None | None | I |
P/C | 0.5347 | ambiguous | 0.4847 | ambiguous | -0.917 | Destabilizing | 0.999 | D | 0.679 | prob.neutral | None | None | None | None | I |
P/D | 0.4125 | ambiguous | 0.3724 | ambiguous | -1.153 | Destabilizing | 0.986 | D | 0.686 | prob.neutral | None | None | None | None | I |
P/E | 0.321 | likely_benign | 0.2888 | benign | -1.155 | Destabilizing | 0.953 | D | 0.61 | neutral | None | None | None | None | I |
P/F | 0.4949 | ambiguous | 0.4785 | ambiguous | -0.982 | Destabilizing | 0.999 | D | 0.707 | prob.neutral | None | None | None | None | I |
P/G | 0.3514 | ambiguous | 0.3334 | benign | -1.598 | Destabilizing | 0.91 | D | 0.597 | neutral | None | None | None | None | I |
P/H | 0.2141 | likely_benign | 0.1933 | benign | -1.079 | Destabilizing | 0.999 | D | 0.684 | prob.neutral | N | 0.509575668 | None | None | I |
P/I | 0.2886 | likely_benign | 0.2796 | benign | -0.558 | Destabilizing | 0.993 | D | 0.734 | prob.delet. | None | None | None | None | I |
P/K | 0.2973 | likely_benign | 0.2747 | benign | -1.21 | Destabilizing | 0.386 | N | 0.373 | neutral | None | None | None | None | I |
P/L | 0.1396 | likely_benign | 0.1306 | benign | -0.558 | Destabilizing | 0.982 | D | 0.686 | prob.neutral | N | 0.50662802 | None | None | I |
P/M | 0.3265 | likely_benign | 0.3172 | benign | -0.481 | Destabilizing | 0.999 | D | 0.682 | prob.neutral | None | None | None | None | I |
P/N | 0.336 | likely_benign | 0.3232 | benign | -1.01 | Destabilizing | 0.986 | D | 0.705 | prob.neutral | None | None | None | None | I |
P/Q | 0.2027 | likely_benign | 0.1858 | benign | -1.155 | Destabilizing | 0.986 | D | 0.716 | prob.delet. | None | None | None | None | I |
P/R | 0.207 | likely_benign | 0.186 | benign | -0.674 | Destabilizing | 0.964 | D | 0.704 | prob.neutral | N | 0.492249935 | None | None | I |
P/S | 0.1479 | likely_benign | 0.1336 | benign | -1.489 | Destabilizing | 0.322 | N | 0.372 | neutral | N | 0.493308401 | None | None | I |
P/T | 0.1123 | likely_benign | 0.1008 | benign | -1.375 | Destabilizing | 0.885 | D | 0.621 | neutral | N | 0.481182998 | None | None | I |
P/V | 0.2088 | likely_benign | 0.1989 | benign | -0.767 | Destabilizing | 0.986 | D | 0.666 | neutral | None | None | None | None | I |
P/W | 0.7033 | likely_pathogenic | 0.6691 | pathogenic | -1.166 | Destabilizing | 0.999 | D | 0.634 | neutral | None | None | None | None | I |
P/Y | 0.49 | ambiguous | 0.4655 | ambiguous | -0.878 | Destabilizing | 0.999 | D | 0.709 | prob.delet. | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.