Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16979 | 51160;51161;51162 | chr2:178611194;178611193;178611192 | chr2:179475921;179475920;179475919 |
N2AB | 15338 | 46237;46238;46239 | chr2:178611194;178611193;178611192 | chr2:179475921;179475920;179475919 |
N2A | 14411 | 43456;43457;43458 | chr2:178611194;178611193;178611192 | chr2:179475921;179475920;179475919 |
N2B | 7914 | 23965;23966;23967 | chr2:178611194;178611193;178611192 | chr2:179475921;179475920;179475919 |
Novex-1 | 8039 | 24340;24341;24342 | chr2:178611194;178611193;178611192 | chr2:179475921;179475920;179475919 |
Novex-2 | 8106 | 24541;24542;24543 | chr2:178611194;178611193;178611192 | chr2:179475921;179475920;179475919 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/G | rs1559776809 | None | 0.99 | N | 0.544 | 0.433 | 0.506793516358 | gnomAD-4.0.0 | 3.18681E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 5.57693E-05 | None | 0 | 0 | 0 | 0 | 0 |
R/K | None | None | 0.4 | N | 0.164 | 0.117 | 0.285698343383 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 0 |
R/S | None | None | 0.98 | N | 0.589 | 0.37 | 0.314417295294 | gnomAD-4.0.0 | 6.84606E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 1.65832E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.6217 | likely_pathogenic | 0.5991 | pathogenic | -0.017 | Destabilizing | 0.985 | D | 0.573 | neutral | None | None | None | None | I |
R/C | 0.2289 | likely_benign | 0.2238 | benign | -0.079 | Destabilizing | 1.0 | D | 0.641 | neutral | None | None | None | None | I |
R/D | 0.8446 | likely_pathogenic | 0.8255 | pathogenic | -0.011 | Destabilizing | 0.998 | D | 0.579 | neutral | None | None | None | None | I |
R/E | 0.545 | ambiguous | 0.5358 | ambiguous | 0.058 | Stabilizing | 0.985 | D | 0.521 | neutral | None | None | None | None | I |
R/F | 0.7046 | likely_pathogenic | 0.7054 | pathogenic | -0.183 | Destabilizing | 0.998 | D | 0.631 | neutral | None | None | None | None | I |
R/G | 0.5334 | ambiguous | 0.4993 | ambiguous | -0.231 | Destabilizing | 0.99 | D | 0.544 | neutral | N | 0.498894099 | None | None | I |
R/H | 0.1118 | likely_benign | 0.1094 | benign | -0.718 | Destabilizing | 0.999 | D | 0.569 | neutral | None | None | None | None | I |
R/I | 0.3886 | ambiguous | 0.3764 | ambiguous | 0.515 | Stabilizing | 0.606 | D | 0.413 | neutral | N | 0.510139467 | None | None | I |
R/K | 0.136 | likely_benign | 0.1411 | benign | -0.032 | Destabilizing | 0.4 | N | 0.164 | neutral | N | 0.483335599 | None | None | I |
R/L | 0.3552 | ambiguous | 0.3427 | ambiguous | 0.515 | Stabilizing | 0.971 | D | 0.559 | neutral | None | None | None | None | I |
R/M | 0.404 | ambiguous | 0.392 | ambiguous | 0.104 | Stabilizing | 0.998 | D | 0.605 | neutral | None | None | None | None | I |
R/N | 0.7163 | likely_pathogenic | 0.7079 | pathogenic | 0.274 | Stabilizing | 0.998 | D | 0.537 | neutral | None | None | None | None | I |
R/P | 0.9498 | likely_pathogenic | 0.9394 | pathogenic | 0.359 | Stabilizing | 0.999 | D | 0.642 | neutral | None | None | None | None | I |
R/Q | 0.1337 | likely_benign | 0.1298 | benign | 0.147 | Stabilizing | 0.996 | D | 0.582 | neutral | None | None | None | None | I |
R/S | 0.6386 | likely_pathogenic | 0.6161 | pathogenic | -0.126 | Destabilizing | 0.98 | D | 0.589 | neutral | N | 0.489412855 | None | None | I |
R/T | 0.3417 | ambiguous | 0.3209 | benign | 0.084 | Stabilizing | 0.99 | D | 0.572 | neutral | N | 0.487524179 | None | None | I |
R/V | 0.4749 | ambiguous | 0.4614 | ambiguous | 0.359 | Stabilizing | 0.971 | D | 0.559 | neutral | None | None | None | None | I |
R/W | 0.2655 | likely_benign | 0.2619 | benign | -0.187 | Destabilizing | 1.0 | D | 0.704 | prob.neutral | None | None | None | None | I |
R/Y | 0.5321 | ambiguous | 0.5323 | ambiguous | 0.214 | Stabilizing | 0.999 | D | 0.637 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.