Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16980 | 51163;51164;51165 | chr2:178611191;178611190;178611189 | chr2:179475918;179475917;179475916 |
N2AB | 15339 | 46240;46241;46242 | chr2:178611191;178611190;178611189 | chr2:179475918;179475917;179475916 |
N2A | 14412 | 43459;43460;43461 | chr2:178611191;178611190;178611189 | chr2:179475918;179475917;179475916 |
N2B | 7915 | 23968;23969;23970 | chr2:178611191;178611190;178611189 | chr2:179475918;179475917;179475916 |
Novex-1 | 8040 | 24343;24344;24345 | chr2:178611191;178611190;178611189 | chr2:179475918;179475917;179475916 |
Novex-2 | 8107 | 24544;24545;24546 | chr2:178611191;178611190;178611189 | chr2:179475918;179475917;179475916 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/T | None | None | 0.955 | D | 0.692 | 0.458 | 0.493156425868 | gnomAD-4.0.0 | 3.1869E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.72357E-06 | 0 | 0 |
A/V | None | None | 0.977 | D | 0.73 | 0.542 | 0.583551733957 | gnomAD-4.0.0 | 1.59345E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.8618E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.8534 | likely_pathogenic | 0.8267 | pathogenic | -0.654 | Destabilizing | 1.0 | D | 0.757 | deleterious | None | None | None | None | I |
A/D | 0.9903 | likely_pathogenic | 0.9836 | pathogenic | -1.476 | Destabilizing | 0.993 | D | 0.761 | deleterious | D | 0.657983381 | None | None | I |
A/E | 0.9934 | likely_pathogenic | 0.9891 | pathogenic | -1.407 | Destabilizing | 0.995 | D | 0.795 | deleterious | None | None | None | None | I |
A/F | 0.9824 | likely_pathogenic | 0.9734 | pathogenic | -0.702 | Destabilizing | 0.999 | D | 0.749 | deleterious | None | None | None | None | I |
A/G | 0.1808 | likely_benign | 0.1536 | benign | -1.158 | Destabilizing | 0.955 | D | 0.543 | neutral | N | 0.433438928 | None | None | I |
A/H | 0.9931 | likely_pathogenic | 0.9887 | pathogenic | -1.604 | Destabilizing | 1.0 | D | 0.68 | prob.neutral | None | None | None | None | I |
A/I | 0.9844 | likely_pathogenic | 0.9763 | pathogenic | 0.067 | Stabilizing | 0.998 | D | 0.797 | deleterious | None | None | None | None | I |
A/K | 0.9986 | likely_pathogenic | 0.9972 | pathogenic | -1.224 | Destabilizing | 0.995 | D | 0.799 | deleterious | None | None | None | None | I |
A/L | 0.9497 | likely_pathogenic | 0.9263 | pathogenic | 0.067 | Stabilizing | 0.983 | D | 0.741 | deleterious | None | None | None | None | I |
A/M | 0.9564 | likely_pathogenic | 0.9383 | pathogenic | 0.065 | Stabilizing | 1.0 | D | 0.705 | prob.neutral | None | None | None | None | I |
A/N | 0.9815 | likely_pathogenic | 0.9704 | pathogenic | -1.088 | Destabilizing | 0.995 | D | 0.75 | deleterious | None | None | None | None | I |
A/P | 0.9893 | likely_pathogenic | 0.9807 | pathogenic | -0.178 | Destabilizing | 0.997 | D | 0.791 | deleterious | D | 0.699369731 | None | None | I |
A/Q | 0.9897 | likely_pathogenic | 0.9842 | pathogenic | -1.08 | Destabilizing | 0.998 | D | 0.785 | deleterious | None | None | None | None | I |
A/R | 0.9946 | likely_pathogenic | 0.9902 | pathogenic | -1.095 | Destabilizing | 0.995 | D | 0.78 | deleterious | None | None | None | None | I |
A/S | 0.2598 | likely_benign | 0.2296 | benign | -1.433 | Destabilizing | 0.568 | D | 0.381 | neutral | D | 0.540958484 | None | None | I |
A/T | 0.7976 | likely_pathogenic | 0.7275 | pathogenic | -1.259 | Destabilizing | 0.955 | D | 0.692 | prob.neutral | D | 0.660173836 | None | None | I |
A/V | 0.9057 | likely_pathogenic | 0.8676 | pathogenic | -0.178 | Destabilizing | 0.977 | D | 0.73 | prob.delet. | D | 0.699369731 | None | None | I |
A/W | 0.9979 | likely_pathogenic | 0.9962 | pathogenic | -1.314 | Destabilizing | 1.0 | D | 0.674 | neutral | None | None | None | None | I |
A/Y | 0.9899 | likely_pathogenic | 0.9845 | pathogenic | -0.785 | Destabilizing | 1.0 | D | 0.738 | prob.delet. | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.