Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16981 | 51166;51167;51168 | chr2:178611188;178611187;178611186 | chr2:179475915;179475914;179475913 |
N2AB | 15340 | 46243;46244;46245 | chr2:178611188;178611187;178611186 | chr2:179475915;179475914;179475913 |
N2A | 14413 | 43462;43463;43464 | chr2:178611188;178611187;178611186 | chr2:179475915;179475914;179475913 |
N2B | 7916 | 23971;23972;23973 | chr2:178611188;178611187;178611186 | chr2:179475915;179475914;179475913 |
Novex-1 | 8041 | 24346;24347;24348 | chr2:178611188;178611187;178611186 | chr2:179475915;179475914;179475913 |
Novex-2 | 8108 | 24547;24548;24549 | chr2:178611188;178611187;178611186 | chr2:179475915;179475914;179475913 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | rs1323997384 | None | 0.999 | N | 0.577 | 0.351 | 0.651059218688 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | I | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
V/A | rs1323997384 | None | 0.999 | N | 0.577 | 0.351 | 0.651059218688 | gnomAD-4.0.0 | 6.58025E-06 | None | None | None | None | I | None | 2.41488E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.4772 | ambiguous | 0.4298 | ambiguous | -0.419 | Destabilizing | 0.999 | D | 0.577 | neutral | N | 0.478166859 | None | None | I |
V/C | 0.8521 | likely_pathogenic | 0.8451 | pathogenic | -0.675 | Destabilizing | 1.0 | D | 0.711 | prob.delet. | None | None | None | None | I |
V/D | 0.8564 | likely_pathogenic | 0.8057 | pathogenic | -0.63 | Destabilizing | 1.0 | D | 0.76 | deleterious | N | 0.484814305 | None | None | I |
V/E | 0.723 | likely_pathogenic | 0.6625 | pathogenic | -0.73 | Destabilizing | 1.0 | D | 0.751 | deleterious | None | None | None | None | I |
V/F | 0.28 | likely_benign | 0.2523 | benign | -0.644 | Destabilizing | 1.0 | D | 0.742 | deleterious | N | 0.496167006 | None | None | I |
V/G | 0.6598 | likely_pathogenic | 0.5808 | pathogenic | -0.539 | Destabilizing | 1.0 | D | 0.738 | prob.delet. | N | 0.504439297 | None | None | I |
V/H | 0.8355 | likely_pathogenic | 0.7983 | pathogenic | -0.068 | Destabilizing | 1.0 | D | 0.764 | deleterious | None | None | None | None | I |
V/I | 0.0932 | likely_benign | 0.0911 | benign | -0.239 | Destabilizing | 0.997 | D | 0.493 | neutral | N | 0.496167006 | None | None | I |
V/K | 0.6927 | likely_pathogenic | 0.6369 | pathogenic | -0.544 | Destabilizing | 1.0 | D | 0.751 | deleterious | None | None | None | None | I |
V/L | 0.3507 | ambiguous | 0.3232 | benign | -0.239 | Destabilizing | 0.997 | D | 0.574 | neutral | N | 0.505846909 | None | None | I |
V/M | 0.2575 | likely_benign | 0.2318 | benign | -0.494 | Destabilizing | 1.0 | D | 0.755 | deleterious | None | None | None | None | I |
V/N | 0.6371 | likely_pathogenic | 0.6007 | pathogenic | -0.315 | Destabilizing | 1.0 | D | 0.767 | deleterious | None | None | None | None | I |
V/P | 0.9507 | likely_pathogenic | 0.923 | pathogenic | -0.267 | Destabilizing | 1.0 | D | 0.763 | deleterious | None | None | None | None | I |
V/Q | 0.6356 | likely_pathogenic | 0.5769 | pathogenic | -0.546 | Destabilizing | 1.0 | D | 0.767 | deleterious | None | None | None | None | I |
V/R | 0.6032 | likely_pathogenic | 0.5257 | ambiguous | -0.02 | Destabilizing | 1.0 | D | 0.766 | deleterious | None | None | None | None | I |
V/S | 0.4891 | ambiguous | 0.4519 | ambiguous | -0.596 | Destabilizing | 1.0 | D | 0.755 | deleterious | None | None | None | None | I |
V/T | 0.4523 | ambiguous | 0.4276 | ambiguous | -0.602 | Destabilizing | 0.999 | D | 0.709 | prob.delet. | None | None | None | None | I |
V/W | 0.9321 | likely_pathogenic | 0.9028 | pathogenic | -0.737 | Destabilizing | 1.0 | D | 0.77 | deleterious | None | None | None | None | I |
V/Y | 0.757 | likely_pathogenic | 0.719 | pathogenic | -0.447 | Destabilizing | 1.0 | D | 0.745 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.