Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16994 | 51205;51206;51207 | chr2:178611149;178611148;178611147 | chr2:179475876;179475875;179475874 |
N2AB | 15353 | 46282;46283;46284 | chr2:178611149;178611148;178611147 | chr2:179475876;179475875;179475874 |
N2A | 14426 | 43501;43502;43503 | chr2:178611149;178611148;178611147 | chr2:179475876;179475875;179475874 |
N2B | 7929 | 24010;24011;24012 | chr2:178611149;178611148;178611147 | chr2:179475876;179475875;179475874 |
Novex-1 | 8054 | 24385;24386;24387 | chr2:178611149;178611148;178611147 | chr2:179475876;179475875;179475874 |
Novex-2 | 8121 | 24586;24587;24588 | chr2:178611149;178611148;178611147 | chr2:179475876;179475875;179475874 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | rs1230487887 | None | 0.004 | D | 0.281 | 0.087 | 0.115124310173 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
E/D | rs1230487887 | None | 0.004 | D | 0.281 | 0.087 | 0.115124310173 | gnomAD-4.0.0 | 6.57999E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.47202E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1141 | likely_benign | 0.1104 | benign | -0.495 | Destabilizing | 0.581 | D | 0.677 | prob.neutral | N | 0.511545165 | None | None | N |
E/C | 0.8088 | likely_pathogenic | 0.8245 | pathogenic | -0.243 | Destabilizing | 0.993 | D | 0.741 | deleterious | None | None | None | None | N |
E/D | 0.1069 | likely_benign | 0.1077 | benign | -0.403 | Destabilizing | 0.004 | N | 0.281 | neutral | D | 0.53426907 | None | None | N |
E/F | 0.7049 | likely_pathogenic | 0.735 | pathogenic | -0.303 | Destabilizing | 0.993 | D | 0.722 | prob.delet. | None | None | None | None | N |
E/G | 0.1968 | likely_benign | 0.1912 | benign | -0.711 | Destabilizing | 0.83 | D | 0.644 | neutral | D | 0.613595762 | None | None | N |
E/H | 0.4789 | ambiguous | 0.5126 | ambiguous | -0.079 | Destabilizing | 0.98 | D | 0.689 | prob.neutral | None | None | None | None | N |
E/I | 0.236 | likely_benign | 0.2443 | benign | 0.05 | Stabilizing | 0.929 | D | 0.735 | prob.delet. | None | None | None | None | N |
E/K | 0.174 | likely_benign | 0.2001 | benign | -0.011 | Destabilizing | 0.581 | D | 0.623 | neutral | D | 0.554119919 | None | None | N |
E/L | 0.3063 | likely_benign | 0.3105 | benign | 0.05 | Stabilizing | 0.929 | D | 0.731 | prob.delet. | None | None | None | None | N |
E/M | 0.3635 | ambiguous | 0.3583 | ambiguous | 0.11 | Stabilizing | 0.993 | D | 0.704 | prob.neutral | None | None | None | None | N |
E/N | 0.2073 | likely_benign | 0.2163 | benign | -0.255 | Destabilizing | 0.764 | D | 0.695 | prob.neutral | None | None | None | None | N |
E/P | 0.3176 | likely_benign | 0.2932 | benign | -0.111 | Destabilizing | 0.929 | D | 0.739 | prob.delet. | None | None | None | None | N |
E/Q | 0.1663 | likely_benign | 0.1746 | benign | -0.215 | Destabilizing | 0.83 | D | 0.636 | neutral | D | 0.556879528 | None | None | N |
E/R | 0.3294 | likely_benign | 0.3634 | ambiguous | 0.292 | Stabilizing | 0.866 | D | 0.718 | prob.delet. | None | None | None | None | N |
E/S | 0.2097 | likely_benign | 0.2082 | benign | -0.465 | Destabilizing | 0.48 | N | 0.647 | neutral | None | None | None | None | N |
E/T | 0.1779 | likely_benign | 0.176 | benign | -0.297 | Destabilizing | 0.866 | D | 0.708 | prob.delet. | None | None | None | None | N |
E/V | 0.1383 | likely_benign | 0.1356 | benign | -0.111 | Destabilizing | 0.908 | D | 0.717 | prob.delet. | N | 0.514027164 | None | None | N |
E/W | 0.8848 | likely_pathogenic | 0.9001 | pathogenic | -0.137 | Destabilizing | 0.993 | D | 0.749 | deleterious | None | None | None | None | N |
E/Y | 0.5834 | likely_pathogenic | 0.6173 | pathogenic | -0.072 | Destabilizing | 0.993 | D | 0.711 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.