Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17005 | 51238;51239;51240 | chr2:178611116;178611115;178611114 | chr2:179475843;179475842;179475841 |
N2AB | 15364 | 46315;46316;46317 | chr2:178611116;178611115;178611114 | chr2:179475843;179475842;179475841 |
N2A | 14437 | 43534;43535;43536 | chr2:178611116;178611115;178611114 | chr2:179475843;179475842;179475841 |
N2B | 7940 | 24043;24044;24045 | chr2:178611116;178611115;178611114 | chr2:179475843;179475842;179475841 |
Novex-1 | 8065 | 24418;24419;24420 | chr2:178611116;178611115;178611114 | chr2:179475843;179475842;179475841 |
Novex-2 | 8132 | 24619;24620;24621 | chr2:178611116;178611115;178611114 | chr2:179475843;179475842;179475841 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/K | rs752077995 | None | None | N | 0.252 | 0.165 | 0.0297737177859 | gnomAD-4.0.0 | 2.73825E-06 | None | None | None | None | N | None | 5.98552E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99831E-07 | 0 | 1.65793E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.1521 | likely_benign | 0.156 | benign | -0.454 | Destabilizing | None | N | 0.442 | neutral | None | None | None | None | N |
N/C | 0.1959 | likely_benign | 0.1859 | benign | 0.368 | Stabilizing | 0.676 | D | 0.655 | neutral | None | None | None | None | N |
N/D | 0.1492 | likely_benign | 0.1604 | benign | -0.053 | Destabilizing | 0.012 | N | 0.447 | neutral | N | 0.497894614 | None | None | N |
N/E | 0.2887 | likely_benign | 0.3058 | benign | -0.04 | Destabilizing | 0.016 | N | 0.459 | neutral | None | None | None | None | N |
N/F | 0.4616 | ambiguous | 0.4746 | ambiguous | -0.579 | Destabilizing | 0.356 | N | 0.665 | neutral | None | None | None | None | N |
N/G | 0.2208 | likely_benign | 0.223 | benign | -0.708 | Destabilizing | 0.016 | N | 0.411 | neutral | None | None | None | None | N |
N/H | 0.1167 | likely_benign | 0.1217 | benign | -0.727 | Destabilizing | 0.295 | N | 0.605 | neutral | N | 0.51091066 | None | None | N |
N/I | 0.1613 | likely_benign | 0.1638 | benign | 0.144 | Stabilizing | 0.171 | N | 0.663 | neutral | N | 0.503717841 | None | None | N |
N/K | 0.2094 | likely_benign | 0.2396 | benign | -0.002 | Destabilizing | None | N | 0.252 | neutral | N | 0.488956044 | None | None | N |
N/L | 0.1914 | likely_benign | 0.1902 | benign | 0.144 | Stabilizing | 0.072 | N | 0.611 | neutral | None | None | None | None | N |
N/M | 0.2237 | likely_benign | 0.2202 | benign | 0.576 | Stabilizing | 0.628 | D | 0.657 | neutral | None | None | None | None | N |
N/P | 0.502 | ambiguous | 0.5241 | ambiguous | -0.026 | Destabilizing | 0.072 | N | 0.657 | neutral | None | None | None | None | N |
N/Q | 0.2543 | likely_benign | 0.2657 | benign | -0.49 | Destabilizing | 0.038 | N | 0.559 | neutral | None | None | None | None | N |
N/R | 0.2615 | likely_benign | 0.2825 | benign | -0.028 | Destabilizing | 0.038 | N | 0.483 | neutral | None | None | None | None | N |
N/S | 0.0724 | likely_benign | 0.0678 | benign | -0.336 | Destabilizing | None | N | 0.254 | neutral | N | 0.461946031 | None | None | N |
N/T | 0.0764 | likely_benign | 0.0742 | benign | -0.154 | Destabilizing | 0.012 | N | 0.457 | neutral | N | 0.477026478 | None | None | N |
N/V | 0.1667 | likely_benign | 0.1675 | benign | -0.026 | Destabilizing | 0.072 | N | 0.613 | neutral | None | None | None | None | N |
N/W | 0.6378 | likely_pathogenic | 0.6319 | pathogenic | -0.475 | Destabilizing | 0.864 | D | 0.677 | prob.neutral | None | None | None | None | N |
N/Y | 0.1271 | likely_benign | 0.1324 | benign | -0.234 | Destabilizing | 0.295 | N | 0.663 | neutral | N | 0.510373586 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.