Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17007 | 51244;51245;51246 | chr2:178611110;178611109;178611108 | chr2:179475837;179475836;179475835 |
N2AB | 15366 | 46321;46322;46323 | chr2:178611110;178611109;178611108 | chr2:179475837;179475836;179475835 |
N2A | 14439 | 43540;43541;43542 | chr2:178611110;178611109;178611108 | chr2:179475837;179475836;179475835 |
N2B | 7942 | 24049;24050;24051 | chr2:178611110;178611109;178611108 | chr2:179475837;179475836;179475835 |
Novex-1 | 8067 | 24424;24425;24426 | chr2:178611110;178611109;178611108 | chr2:179475837;179475836;179475835 |
Novex-2 | 8134 | 24625;24626;24627 | chr2:178611110;178611109;178611108 | chr2:179475837;179475836;179475835 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/R | None | None | 0.523 | N | 0.159 | 0.139 | 0.0986583533028 | gnomAD-4.0.0 | 1.59322E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86205E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/A | 0.2133 | likely_benign | 0.207 | benign | 0.209 | Stabilizing | 0.228 | N | 0.24 | neutral | None | None | None | None | I |
H/C | 0.19 | likely_benign | 0.1665 | benign | 0.319 | Stabilizing | 0.94 | D | 0.258 | neutral | None | None | None | None | I |
H/D | 0.1823 | likely_benign | 0.1614 | benign | -0.291 | Destabilizing | 0.523 | D | 0.286 | neutral | N | 0.390421016 | None | None | I |
H/E | 0.281 | likely_benign | 0.2792 | benign | -0.277 | Destabilizing | 0.375 | N | 0.115 | neutral | None | None | None | None | I |
H/F | 0.2411 | likely_benign | 0.2561 | benign | 0.803 | Stabilizing | 0.129 | N | 0.249 | neutral | None | None | None | None | I |
H/G | 0.238 | likely_benign | 0.2159 | benign | -0.013 | Destabilizing | 0.593 | D | 0.281 | neutral | None | None | None | None | I |
H/I | 0.2604 | likely_benign | 0.2443 | benign | 0.763 | Stabilizing | 0.004 | N | 0.182 | neutral | None | None | None | None | I |
H/K | 0.2592 | likely_benign | 0.2456 | benign | 0.109 | Stabilizing | 0.418 | N | 0.3 | neutral | None | None | None | None | I |
H/L | 0.124 | likely_benign | 0.115 | benign | 0.763 | Stabilizing | 0.047 | N | 0.261 | neutral | N | 0.436329209 | None | None | I |
H/M | 0.3682 | ambiguous | 0.3544 | ambiguous | 0.432 | Stabilizing | 0.836 | D | 0.271 | neutral | None | None | None | None | I |
H/N | 0.0845 | likely_benign | 0.0792 | benign | -0.091 | Destabilizing | 0.523 | D | 0.151 | neutral | N | 0.400529011 | None | None | I |
H/P | 0.1342 | likely_benign | 0.1223 | benign | 0.601 | Stabilizing | 0.921 | D | 0.356 | neutral | N | 0.420048176 | None | None | I |
H/Q | 0.1764 | likely_benign | 0.1735 | benign | -0.003 | Destabilizing | 0.523 | D | 0.187 | neutral | N | 0.435294528 | None | None | I |
H/R | 0.1235 | likely_benign | 0.1159 | benign | -0.319 | Destabilizing | 0.523 | D | 0.159 | neutral | N | 0.442839577 | None | None | I |
H/S | 0.1741 | likely_benign | 0.167 | benign | None | Stabilizing | 0.228 | N | 0.269 | neutral | None | None | None | None | I |
H/T | 0.2076 | likely_benign | 0.2007 | benign | 0.11 | Stabilizing | 0.593 | D | 0.287 | neutral | None | None | None | None | I |
H/V | 0.217 | likely_benign | 0.2044 | benign | 0.601 | Stabilizing | 0.061 | N | 0.278 | neutral | None | None | None | None | I |
H/W | 0.4172 | ambiguous | 0.3828 | ambiguous | 0.734 | Stabilizing | 0.836 | D | 0.259 | neutral | None | None | None | None | I |
H/Y | 0.0838 | likely_benign | 0.086 | benign | 0.951 | Stabilizing | None | N | 0.083 | neutral | N | 0.431734083 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.