Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17008 | 51247;51248;51249 | chr2:178611107;178611106;178611105 | chr2:179475834;179475833;179475832 |
N2AB | 15367 | 46324;46325;46326 | chr2:178611107;178611106;178611105 | chr2:179475834;179475833;179475832 |
N2A | 14440 | 43543;43544;43545 | chr2:178611107;178611106;178611105 | chr2:179475834;179475833;179475832 |
N2B | 7943 | 24052;24053;24054 | chr2:178611107;178611106;178611105 | chr2:179475834;179475833;179475832 |
Novex-1 | 8068 | 24427;24428;24429 | chr2:178611107;178611106;178611105 | chr2:179475834;179475833;179475832 |
Novex-2 | 8135 | 24628;24629;24630 | chr2:178611107;178611106;178611105 | chr2:179475834;179475833;179475832 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/V | None | None | None | N | 0.128 | 0.046 | 0.344945010812 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.1958 | likely_benign | 0.1985 | benign | -1.212 | Destabilizing | None | N | 0.199 | neutral | None | None | None | None | N |
I/C | 0.4677 | ambiguous | 0.4652 | ambiguous | -0.477 | Destabilizing | 0.667 | D | 0.429 | neutral | None | None | None | None | N |
I/D | 0.4356 | ambiguous | 0.4248 | ambiguous | -0.541 | Destabilizing | 0.22 | N | 0.486 | neutral | None | None | None | None | N |
I/E | 0.4001 | ambiguous | 0.4032 | ambiguous | -0.581 | Destabilizing | 0.22 | N | 0.509 | neutral | None | None | None | None | N |
I/F | 0.1153 | likely_benign | 0.1199 | benign | -0.927 | Destabilizing | 0.001 | N | 0.203 | neutral | N | 0.465506486 | None | None | N |
I/G | 0.4026 | ambiguous | 0.3912 | ambiguous | -1.474 | Destabilizing | 0.124 | N | 0.459 | neutral | None | None | None | None | N |
I/H | 0.3062 | likely_benign | 0.3053 | benign | -0.696 | Destabilizing | 0.958 | D | 0.463 | neutral | None | None | None | None | N |
I/K | 0.2627 | likely_benign | 0.2675 | benign | -0.673 | Destabilizing | 0.22 | N | 0.506 | neutral | None | None | None | None | N |
I/L | 0.0962 | likely_benign | 0.0949 | benign | -0.597 | Destabilizing | 0.019 | N | 0.193 | neutral | N | 0.472427052 | None | None | N |
I/M | 0.0988 | likely_benign | 0.1035 | benign | -0.368 | Destabilizing | 0.427 | N | 0.405 | neutral | N | 0.509217456 | None | None | N |
I/N | 0.1432 | likely_benign | 0.1386 | benign | -0.387 | Destabilizing | 0.427 | N | 0.488 | neutral | N | 0.377726886 | None | None | N |
I/P | 0.6072 | likely_pathogenic | 0.5601 | ambiguous | -0.769 | Destabilizing | 0.667 | D | 0.493 | neutral | None | None | None | None | N |
I/Q | 0.2935 | likely_benign | 0.2973 | benign | -0.593 | Destabilizing | 0.667 | D | 0.484 | neutral | None | None | None | None | N |
I/R | 0.2096 | likely_benign | 0.2026 | benign | -0.075 | Destabilizing | 0.497 | N | 0.49 | neutral | None | None | None | None | N |
I/S | 0.1561 | likely_benign | 0.1486 | benign | -0.929 | Destabilizing | 0.042 | N | 0.445 | neutral | N | 0.436892007 | None | None | N |
I/T | 0.1318 | likely_benign | 0.1364 | benign | -0.86 | Destabilizing | None | N | 0.196 | neutral | N | 0.365964753 | None | None | N |
I/V | 0.0712 | likely_benign | 0.073 | benign | -0.769 | Destabilizing | None | N | 0.128 | neutral | N | 0.459876114 | None | None | N |
I/W | 0.5966 | likely_pathogenic | 0.6005 | pathogenic | -0.981 | Destabilizing | 0.958 | D | 0.468 | neutral | None | None | None | None | N |
I/Y | 0.3111 | likely_benign | 0.3118 | benign | -0.756 | Destabilizing | 0.331 | N | 0.442 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.