Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17010 | 51253;51254;51255 | chr2:178611101;178611100;178611099 | chr2:179475828;179475827;179475826 |
N2AB | 15369 | 46330;46331;46332 | chr2:178611101;178611100;178611099 | chr2:179475828;179475827;179475826 |
N2A | 14442 | 43549;43550;43551 | chr2:178611101;178611100;178611099 | chr2:179475828;179475827;179475826 |
N2B | 7945 | 24058;24059;24060 | chr2:178611101;178611100;178611099 | chr2:179475828;179475827;179475826 |
Novex-1 | 8070 | 24433;24434;24435 | chr2:178611101;178611100;178611099 | chr2:179475828;179475827;179475826 |
Novex-2 | 8137 | 24634;24635;24636 | chr2:178611101;178611100;178611099 | chr2:179475828;179475827;179475826 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/V | rs1164633775 | 0.423 | 0.001 | N | 0.457 | 0.132 | 0.187945064343 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
A/V | rs1164633775 | 0.423 | 0.001 | N | 0.457 | 0.132 | 0.187945064343 | gnomAD-4.0.0 | 1.59323E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43328E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.4042 | ambiguous | 0.3736 | ambiguous | -1.191 | Destabilizing | 0.005 | N | 0.521 | neutral | None | None | None | None | N |
A/D | 0.9415 | likely_pathogenic | 0.9315 | pathogenic | -2.647 | Highly Destabilizing | 0.69 | D | 0.79 | deleterious | None | None | None | None | N |
A/E | 0.9085 | likely_pathogenic | 0.8889 | pathogenic | -2.368 | Highly Destabilizing | 0.627 | D | 0.789 | deleterious | N | 0.497035598 | None | None | N |
A/F | 0.656 | likely_pathogenic | 0.6113 | pathogenic | -0.363 | Destabilizing | 0.69 | D | 0.798 | deleterious | None | None | None | None | N |
A/G | 0.2525 | likely_benign | 0.254 | benign | -1.425 | Destabilizing | 0.193 | N | 0.718 | prob.delet. | N | 0.453297002 | None | None | N |
A/H | 0.8883 | likely_pathogenic | 0.8694 | pathogenic | -2.225 | Highly Destabilizing | 0.981 | D | 0.755 | deleterious | None | None | None | None | N |
A/I | 0.4 | ambiguous | 0.3443 | ambiguous | 0.632 | Stabilizing | 0.098 | N | 0.749 | deleterious | None | None | None | None | N |
A/K | 0.9612 | likely_pathogenic | 0.9514 | pathogenic | -1.016 | Destabilizing | 0.69 | D | 0.787 | deleterious | None | None | None | None | N |
A/L | 0.3593 | ambiguous | 0.3149 | benign | 0.632 | Stabilizing | 0.002 | N | 0.597 | neutral | None | None | None | None | N |
A/M | 0.4237 | ambiguous | 0.3711 | ambiguous | 0.093 | Stabilizing | 0.69 | D | 0.757 | deleterious | None | None | None | None | N |
A/N | 0.7921 | likely_pathogenic | 0.7773 | pathogenic | -1.598 | Destabilizing | 0.69 | D | 0.806 | deleterious | None | None | None | None | N |
A/P | 0.9485 | likely_pathogenic | 0.9491 | pathogenic | 0.168 | Stabilizing | 0.773 | D | 0.793 | deleterious | N | 0.438370473 | None | None | N |
A/Q | 0.856 | likely_pathogenic | 0.8298 | pathogenic | -1.201 | Destabilizing | 0.818 | D | 0.782 | deleterious | None | None | None | None | N |
A/R | 0.9261 | likely_pathogenic | 0.9051 | pathogenic | -1.444 | Destabilizing | 0.69 | D | 0.798 | deleterious | None | None | None | None | N |
A/S | 0.1411 | likely_benign | 0.1482 | benign | -1.912 | Destabilizing | 0.015 | N | 0.507 | neutral | N | 0.436987728 | None | None | N |
A/T | 0.1216 | likely_benign | 0.1142 | benign | -1.494 | Destabilizing | 0.193 | N | 0.718 | prob.delet. | N | 0.437608206 | None | None | N |
A/V | 0.187 | likely_benign | 0.1532 | benign | 0.168 | Stabilizing | 0.001 | N | 0.457 | neutral | N | 0.448284172 | None | None | N |
A/W | 0.9455 | likely_pathogenic | 0.9334 | pathogenic | -1.373 | Destabilizing | 0.981 | D | 0.779 | deleterious | None | None | None | None | N |
A/Y | 0.82 | likely_pathogenic | 0.7937 | pathogenic | -0.779 | Destabilizing | 0.818 | D | 0.775 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.