Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17012 | 51259;51260;51261 | chr2:178611095;178611094;178611093 | chr2:179475822;179475821;179475820 |
N2AB | 15371 | 46336;46337;46338 | chr2:178611095;178611094;178611093 | chr2:179475822;179475821;179475820 |
N2A | 14444 | 43555;43556;43557 | chr2:178611095;178611094;178611093 | chr2:179475822;179475821;179475820 |
N2B | 7947 | 24064;24065;24066 | chr2:178611095;178611094;178611093 | chr2:179475822;179475821;179475820 |
Novex-1 | 8072 | 24439;24440;24441 | chr2:178611095;178611094;178611093 | chr2:179475822;179475821;179475820 |
Novex-2 | 8139 | 24640;24641;24642 | chr2:178611095;178611094;178611093 | chr2:179475822;179475821;179475820 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/P | None | None | 1.0 | D | 0.905 | 0.883 | 0.911962184262 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.8608 | likely_pathogenic | 0.8747 | pathogenic | -2.631 | Highly Destabilizing | 0.999 | D | 0.764 | deleterious | None | None | None | None | N |
L/C | 0.8092 | likely_pathogenic | 0.8288 | pathogenic | -2.121 | Highly Destabilizing | 1.0 | D | 0.868 | deleterious | None | None | None | None | N |
L/D | 0.9991 | likely_pathogenic | 0.9991 | pathogenic | -3.35 | Highly Destabilizing | 1.0 | D | 0.906 | deleterious | None | None | None | None | N |
L/E | 0.9922 | likely_pathogenic | 0.9922 | pathogenic | -3.03 | Highly Destabilizing | 1.0 | D | 0.889 | deleterious | None | None | None | None | N |
L/F | 0.272 | likely_benign | 0.3139 | benign | -1.586 | Destabilizing | 1.0 | D | 0.823 | deleterious | D | 0.577055508 | None | None | N |
L/G | 0.9805 | likely_pathogenic | 0.9809 | pathogenic | -3.261 | Highly Destabilizing | 1.0 | D | 0.879 | deleterious | None | None | None | None | N |
L/H | 0.9709 | likely_pathogenic | 0.9704 | pathogenic | -2.953 | Highly Destabilizing | 1.0 | D | 0.886 | deleterious | D | 0.775276358 | None | None | N |
L/I | 0.1238 | likely_benign | 0.1426 | benign | -0.753 | Destabilizing | 0.999 | D | 0.655 | neutral | D | 0.555891142 | None | None | N |
L/K | 0.9858 | likely_pathogenic | 0.9841 | pathogenic | -2.141 | Highly Destabilizing | 1.0 | D | 0.889 | deleterious | None | None | None | None | N |
L/M | 0.1927 | likely_benign | 0.2121 | benign | -0.94 | Destabilizing | 1.0 | D | 0.802 | deleterious | None | None | None | None | N |
L/N | 0.9941 | likely_pathogenic | 0.9948 | pathogenic | -2.804 | Highly Destabilizing | 1.0 | D | 0.906 | deleterious | None | None | None | None | N |
L/P | 0.9949 | likely_pathogenic | 0.9943 | pathogenic | -1.367 | Destabilizing | 1.0 | D | 0.905 | deleterious | D | 0.775276358 | None | None | N |
L/Q | 0.9634 | likely_pathogenic | 0.9628 | pathogenic | -2.473 | Highly Destabilizing | 1.0 | D | 0.914 | deleterious | None | None | None | None | N |
L/R | 0.9697 | likely_pathogenic | 0.9644 | pathogenic | -2.163 | Highly Destabilizing | 1.0 | D | 0.905 | deleterious | D | 0.739025159 | None | None | N |
L/S | 0.9805 | likely_pathogenic | 0.9829 | pathogenic | -3.444 | Highly Destabilizing | 1.0 | D | 0.888 | deleterious | None | None | None | None | N |
L/T | 0.9177 | likely_pathogenic | 0.9308 | pathogenic | -2.946 | Highly Destabilizing | 1.0 | D | 0.846 | deleterious | None | None | None | None | N |
L/V | 0.1733 | likely_benign | 0.1893 | benign | -1.367 | Destabilizing | 0.999 | D | 0.66 | neutral | D | 0.628873357 | None | None | N |
L/W | 0.8288 | likely_pathogenic | 0.8247 | pathogenic | -2.019 | Highly Destabilizing | 1.0 | D | 0.874 | deleterious | None | None | None | None | N |
L/Y | 0.8802 | likely_pathogenic | 0.888 | pathogenic | -1.742 | Destabilizing | 1.0 | D | 0.878 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.