Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17024 | 51295;51296;51297 | chr2:178611059;178611058;178611057 | chr2:179475786;179475785;179475784 |
N2AB | 15383 | 46372;46373;46374 | chr2:178611059;178611058;178611057 | chr2:179475786;179475785;179475784 |
N2A | 14456 | 43591;43592;43593 | chr2:178611059;178611058;178611057 | chr2:179475786;179475785;179475784 |
N2B | 7959 | 24100;24101;24102 | chr2:178611059;178611058;178611057 | chr2:179475786;179475785;179475784 |
Novex-1 | 8084 | 24475;24476;24477 | chr2:178611059;178611058;178611057 | chr2:179475786;179475785;179475784 |
Novex-2 | 8151 | 24676;24677;24678 | chr2:178611059;178611058;178611057 | chr2:179475786;179475785;179475784 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/S | rs1389981053 | -1.714 | 0.003 | N | 0.303 | 0.141 | 0.646007317467 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
I/S | rs1389981053 | -1.714 | 0.003 | N | 0.303 | 0.141 | 0.646007317467 | gnomAD-4.0.0 | 3.18653E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 2.86722E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.1868 | likely_benign | 0.163 | benign | -1.552 | Destabilizing | 0.002 | N | 0.295 | neutral | None | None | None | None | N |
I/C | 0.4607 | ambiguous | 0.4157 | ambiguous | -1.053 | Destabilizing | 0.245 | N | 0.468 | neutral | None | None | None | None | N |
I/D | 0.3409 | ambiguous | 0.2954 | benign | -0.543 | Destabilizing | 0.009 | N | 0.337 | neutral | None | None | None | None | N |
I/E | 0.2737 | likely_benign | 0.235 | benign | -0.544 | Destabilizing | 0.004 | N | 0.338 | neutral | None | None | None | None | N |
I/F | 0.1384 | likely_benign | 0.1235 | benign | -1.196 | Destabilizing | 0.033 | N | 0.389 | neutral | N | 0.497213295 | None | None | N |
I/G | 0.3773 | ambiguous | 0.3202 | benign | -1.861 | Destabilizing | 0.008 | N | 0.329 | neutral | None | None | None | None | N |
I/H | 0.2714 | likely_benign | 0.2412 | benign | -1.063 | Destabilizing | 0.245 | N | 0.535 | neutral | None | None | None | None | N |
I/K | 0.1676 | likely_benign | 0.1533 | benign | -0.799 | Destabilizing | 0.009 | N | 0.333 | neutral | None | None | None | None | N |
I/L | 0.0955 | likely_benign | 0.0925 | benign | -0.788 | Destabilizing | 0.001 | N | 0.195 | neutral | N | 0.459570333 | None | None | N |
I/M | 0.0918 | likely_benign | 0.0837 | benign | -0.621 | Destabilizing | 0.033 | N | 0.47 | neutral | N | 0.486499235 | None | None | N |
I/N | 0.1073 | likely_benign | 0.0917 | benign | -0.595 | Destabilizing | None | N | 0.357 | neutral | N | 0.451106007 | None | None | N |
I/P | 0.5708 | likely_pathogenic | 0.5036 | ambiguous | -1.011 | Destabilizing | 0.22 | N | 0.502 | neutral | None | None | None | None | N |
I/Q | 0.2003 | likely_benign | 0.179 | benign | -0.775 | Destabilizing | None | N | 0.328 | neutral | None | None | None | None | N |
I/R | 0.1524 | likely_benign | 0.1372 | benign | -0.289 | Destabilizing | 0.018 | N | 0.437 | neutral | None | None | None | None | N |
I/S | 0.1421 | likely_benign | 0.1267 | benign | -1.324 | Destabilizing | 0.003 | N | 0.303 | neutral | N | 0.464832961 | None | None | N |
I/T | 0.1104 | likely_benign | 0.1007 | benign | -1.201 | Destabilizing | None | N | 0.156 | neutral | N | 0.410754375 | None | None | N |
I/V | 0.0667 | likely_benign | 0.0618 | benign | -1.011 | Destabilizing | None | N | 0.103 | neutral | N | 0.410266758 | None | None | N |
I/W | 0.6741 | likely_pathogenic | 0.6247 | pathogenic | -1.205 | Destabilizing | 0.788 | D | 0.513 | neutral | None | None | None | None | N |
I/Y | 0.3418 | ambiguous | 0.3121 | benign | -0.961 | Destabilizing | 0.085 | N | 0.469 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.