Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17025 | 51298;51299;51300 | chr2:178611056;178611055;178611054 | chr2:179475783;179475782;179475781 |
N2AB | 15384 | 46375;46376;46377 | chr2:178611056;178611055;178611054 | chr2:179475783;179475782;179475781 |
N2A | 14457 | 43594;43595;43596 | chr2:178611056;178611055;178611054 | chr2:179475783;179475782;179475781 |
N2B | 7960 | 24103;24104;24105 | chr2:178611056;178611055;178611054 | chr2:179475783;179475782;179475781 |
Novex-1 | 8085 | 24478;24479;24480 | chr2:178611056;178611055;178611054 | chr2:179475783;179475782;179475781 |
Novex-2 | 8152 | 24679;24680;24681 | chr2:178611056;178611055;178611054 | chr2:179475783;179475782;179475781 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/C | None | None | 1.0 | D | 0.854 | 0.793 | 0.879908228484 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.9967 | likely_pathogenic | 0.9966 | pathogenic | -2.154 | Highly Destabilizing | 0.996 | D | 0.843 | deleterious | None | None | None | None | N |
Y/C | 0.8825 | likely_pathogenic | 0.8908 | pathogenic | -1.694 | Destabilizing | 1.0 | D | 0.854 | deleterious | D | 0.798223113 | None | None | N |
Y/D | 0.9984 | likely_pathogenic | 0.998 | pathogenic | -2.499 | Highly Destabilizing | 0.999 | D | 0.891 | deleterious | D | 0.798223113 | None | None | N |
Y/E | 0.9993 | likely_pathogenic | 0.9991 | pathogenic | -2.248 | Highly Destabilizing | 1.0 | D | 0.884 | deleterious | None | None | None | None | N |
Y/F | 0.1539 | likely_benign | 0.1927 | benign | -0.69 | Destabilizing | 0.217 | N | 0.389 | neutral | D | 0.67955281 | None | None | N |
Y/G | 0.9945 | likely_pathogenic | 0.9935 | pathogenic | -2.616 | Highly Destabilizing | 1.0 | D | 0.883 | deleterious | None | None | None | None | N |
Y/H | 0.9485 | likely_pathogenic | 0.9459 | pathogenic | -1.913 | Destabilizing | 0.999 | D | 0.699 | prob.neutral | D | 0.79884746 | None | None | N |
Y/I | 0.9389 | likely_pathogenic | 0.9538 | pathogenic | -0.639 | Destabilizing | 0.998 | D | 0.791 | deleterious | None | None | None | None | N |
Y/K | 0.999 | likely_pathogenic | 0.9987 | pathogenic | -1.769 | Destabilizing | 1.0 | D | 0.885 | deleterious | None | None | None | None | N |
Y/L | 0.8596 | likely_pathogenic | 0.8748 | pathogenic | -0.639 | Destabilizing | 0.983 | D | 0.771 | deleterious | None | None | None | None | N |
Y/M | 0.9737 | likely_pathogenic | 0.9775 | pathogenic | -0.78 | Destabilizing | 1.0 | D | 0.785 | deleterious | None | None | None | None | N |
Y/N | 0.9885 | likely_pathogenic | 0.9852 | pathogenic | -2.646 | Highly Destabilizing | 0.999 | D | 0.874 | deleterious | D | 0.798223113 | None | None | N |
Y/P | 0.999 | likely_pathogenic | 0.9986 | pathogenic | -1.158 | Destabilizing | 1.0 | D | 0.893 | deleterious | None | None | None | None | N |
Y/Q | 0.9981 | likely_pathogenic | 0.9978 | pathogenic | -2.182 | Highly Destabilizing | 1.0 | D | 0.787 | deleterious | None | None | None | None | N |
Y/R | 0.9945 | likely_pathogenic | 0.9931 | pathogenic | -2.038 | Highly Destabilizing | 1.0 | D | 0.874 | deleterious | None | None | None | None | N |
Y/S | 0.9882 | likely_pathogenic | 0.9856 | pathogenic | -3.048 | Highly Destabilizing | 0.999 | D | 0.871 | deleterious | D | 0.798223113 | None | None | N |
Y/T | 0.9953 | likely_pathogenic | 0.9949 | pathogenic | -2.648 | Highly Destabilizing | 1.0 | D | 0.87 | deleterious | None | None | None | None | N |
Y/V | 0.9274 | likely_pathogenic | 0.9404 | pathogenic | -1.158 | Destabilizing | 0.992 | D | 0.791 | deleterious | None | None | None | None | N |
Y/W | 0.724 | likely_pathogenic | 0.7561 | pathogenic | -0.081 | Destabilizing | 1.0 | D | 0.705 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.