Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17027 | 51304;51305;51306 | chr2:178611050;178611049;178611048 | chr2:179475777;179475776;179475775 |
N2AB | 15386 | 46381;46382;46383 | chr2:178611050;178611049;178611048 | chr2:179475777;179475776;179475775 |
N2A | 14459 | 43600;43601;43602 | chr2:178611050;178611049;178611048 | chr2:179475777;179475776;179475775 |
N2B | 7962 | 24109;24110;24111 | chr2:178611050;178611049;178611048 | chr2:179475777;179475776;179475775 |
Novex-1 | 8087 | 24484;24485;24486 | chr2:178611050;178611049;178611048 | chr2:179475777;179475776;179475775 |
Novex-2 | 8154 | 24685;24686;24687 | chr2:178611050;178611049;178611048 | chr2:179475777;179475776;179475775 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/F | rs770809063 | -1.786 | 0.001 | N | 0.423 | 0.217 | 0.197625483188 | gnomAD-2.1.1 | 1.07E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 2.35E-05 | 0 |
I/F | rs770809063 | -1.786 | 0.001 | N | 0.423 | 0.217 | 0.197625483188 | gnomAD-3.1.2 | 1.97E-05 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 4.42E-05 | 0 | 0 |
I/F | rs770809063 | -1.786 | 0.001 | N | 0.423 | 0.217 | 0.197625483188 | gnomAD-4.0.0 | 6.41386E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.19832E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.7966 | likely_pathogenic | 0.8162 | pathogenic | -2.69 | Highly Destabilizing | 0.035 | N | 0.725 | prob.delet. | None | None | None | None | N |
I/C | 0.8932 | likely_pathogenic | 0.9139 | pathogenic | -2.291 | Highly Destabilizing | 0.824 | D | 0.789 | deleterious | None | None | None | None | N |
I/D | 0.998 | likely_pathogenic | 0.9985 | pathogenic | -3.085 | Highly Destabilizing | 0.555 | D | 0.857 | deleterious | None | None | None | None | N |
I/E | 0.9937 | likely_pathogenic | 0.9946 | pathogenic | -2.814 | Highly Destabilizing | 0.555 | D | 0.842 | deleterious | None | None | None | None | N |
I/F | 0.5164 | ambiguous | 0.5807 | pathogenic | -1.669 | Destabilizing | 0.001 | N | 0.423 | neutral | N | 0.503652305 | None | None | N |
I/G | 0.977 | likely_pathogenic | 0.9807 | pathogenic | -3.29 | Highly Destabilizing | 0.555 | D | 0.836 | deleterious | None | None | None | None | N |
I/H | 0.9914 | likely_pathogenic | 0.9929 | pathogenic | -2.854 | Highly Destabilizing | 0.935 | D | 0.855 | deleterious | None | None | None | None | N |
I/K | 0.9879 | likely_pathogenic | 0.9887 | pathogenic | -2.015 | Highly Destabilizing | 0.555 | D | 0.845 | deleterious | None | None | None | None | N |
I/L | 0.1343 | likely_benign | 0.1464 | benign | -0.926 | Destabilizing | None | N | 0.386 | neutral | N | 0.446783279 | None | None | N |
I/M | 0.1748 | likely_benign | 0.1915 | benign | -1.079 | Destabilizing | 0.317 | N | 0.642 | neutral | N | 0.489541094 | None | None | N |
I/N | 0.9725 | likely_pathogenic | 0.9777 | pathogenic | -2.519 | Highly Destabilizing | 0.741 | D | 0.859 | deleterious | D | 0.573764265 | None | None | N |
I/P | 0.9937 | likely_pathogenic | 0.9955 | pathogenic | -1.498 | Destabilizing | 0.791 | D | 0.854 | deleterious | None | None | None | None | N |
I/Q | 0.9866 | likely_pathogenic | 0.9889 | pathogenic | -2.287 | Highly Destabilizing | 0.791 | D | 0.864 | deleterious | None | None | None | None | N |
I/R | 0.982 | likely_pathogenic | 0.9832 | pathogenic | -1.885 | Destabilizing | 0.555 | D | 0.859 | deleterious | None | None | None | None | N |
I/S | 0.9491 | likely_pathogenic | 0.9575 | pathogenic | -3.252 | Highly Destabilizing | 0.317 | N | 0.812 | deleterious | D | 0.57285347 | None | None | N |
I/T | 0.8756 | likely_pathogenic | 0.9036 | pathogenic | -2.814 | Highly Destabilizing | 0.062 | N | 0.749 | deleterious | D | 0.571375218 | None | None | N |
I/V | 0.0751 | likely_benign | 0.078 | benign | -1.498 | Destabilizing | None | N | 0.307 | neutral | N | 0.410559698 | None | None | N |
I/W | 0.9902 | likely_pathogenic | 0.993 | pathogenic | -2.064 | Highly Destabilizing | 0.824 | D | 0.859 | deleterious | None | None | None | None | N |
I/Y | 0.9521 | likely_pathogenic | 0.9603 | pathogenic | -1.801 | Destabilizing | 0.235 | N | 0.764 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.