Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17032 | 51319;51320;51321 | chr2:178611035;178611034;178611033 | chr2:179475762;179475761;179475760 |
N2AB | 15391 | 46396;46397;46398 | chr2:178611035;178611034;178611033 | chr2:179475762;179475761;179475760 |
N2A | 14464 | 43615;43616;43617 | chr2:178611035;178611034;178611033 | chr2:179475762;179475761;179475760 |
N2B | 7967 | 24124;24125;24126 | chr2:178611035;178611034;178611033 | chr2:179475762;179475761;179475760 |
Novex-1 | 8092 | 24499;24500;24501 | chr2:178611035;178611034;178611033 | chr2:179475762;179475761;179475760 |
Novex-2 | 8159 | 24700;24701;24702 | chr2:178611035;178611034;178611033 | chr2:179475762;179475761;179475760 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/N | rs777424760 | 0.224 | 0.001 | N | 0.249 | 0.172 | 0.146414634003 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.9E-06 | 0 |
K/N | rs777424760 | 0.224 | 0.001 | N | 0.249 | 0.172 | 0.146414634003 | gnomAD-4.0.0 | 3.18746E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.72607E-06 | 0 | 0 |
K/R | None | None | None | N | 0.265 | 0.098 | 0.148003135375 | gnomAD-4.0.0 | 4.80129E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.25001E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.2295 | likely_benign | 0.244 | benign | 0.024 | Stabilizing | 0.002 | N | 0.215 | neutral | None | None | None | None | I |
K/C | 0.6494 | likely_pathogenic | 0.647 | pathogenic | -0.389 | Destabilizing | 0.935 | D | 0.326 | neutral | None | None | None | None | I |
K/D | 0.3934 | ambiguous | 0.3903 | ambiguous | -0.154 | Destabilizing | 0.081 | N | 0.395 | neutral | None | None | None | None | I |
K/E | 0.1596 | likely_benign | 0.1666 | benign | -0.154 | Destabilizing | 0.062 | N | 0.33 | neutral | N | 0.450923787 | None | None | I |
K/F | 0.7412 | likely_pathogenic | 0.7518 | pathogenic | -0.275 | Destabilizing | 0.791 | D | 0.33 | neutral | None | None | None | None | I |
K/G | 0.3167 | likely_benign | 0.3221 | benign | -0.132 | Destabilizing | 0.081 | N | 0.365 | neutral | None | None | None | None | I |
K/H | 0.2572 | likely_benign | 0.2637 | benign | -0.293 | Destabilizing | 0.38 | N | 0.351 | neutral | None | None | None | None | I |
K/I | 0.2601 | likely_benign | 0.2882 | benign | 0.355 | Stabilizing | 0.555 | D | 0.357 | neutral | None | None | None | None | I |
K/L | 0.3149 | likely_benign | 0.3188 | benign | 0.355 | Stabilizing | 0.149 | N | 0.383 | neutral | None | None | None | None | I |
K/M | 0.2128 | likely_benign | 0.2203 | benign | -0.008 | Destabilizing | 0.915 | D | 0.351 | neutral | N | 0.51573258 | None | None | I |
K/N | 0.2799 | likely_benign | 0.2968 | benign | 0.042 | Stabilizing | 0.001 | N | 0.249 | neutral | N | 0.513807335 | None | None | I |
K/P | 0.3661 | ambiguous | 0.3479 | ambiguous | 0.27 | Stabilizing | 0.001 | N | 0.242 | neutral | None | None | None | None | I |
K/Q | 0.1251 | likely_benign | 0.1332 | benign | -0.083 | Destabilizing | 0.317 | N | 0.309 | neutral | N | 0.513305208 | None | None | I |
K/R | 0.0886 | likely_benign | 0.0867 | benign | -0.091 | Destabilizing | None | N | 0.265 | neutral | N | 0.496809114 | None | None | I |
K/S | 0.2469 | likely_benign | 0.2648 | benign | -0.349 | Destabilizing | 0.007 | N | 0.285 | neutral | None | None | None | None | I |
K/T | 0.1137 | likely_benign | 0.1273 | benign | -0.216 | Destabilizing | 0.062 | N | 0.385 | neutral | N | 0.504476498 | None | None | I |
K/V | 0.2419 | likely_benign | 0.2613 | benign | 0.27 | Stabilizing | 0.149 | N | 0.363 | neutral | None | None | None | None | I |
K/W | 0.8011 | likely_pathogenic | 0.7863 | pathogenic | -0.367 | Destabilizing | 0.935 | D | 0.437 | neutral | None | None | None | None | I |
K/Y | 0.5927 | likely_pathogenic | 0.5932 | pathogenic | -0.005 | Destabilizing | 0.791 | D | 0.361 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.