Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17033 | 51322;51323;51324 | chr2:178611032;178611031;178611030 | chr2:179475759;179475758;179475757 |
N2AB | 15392 | 46399;46400;46401 | chr2:178611032;178611031;178611030 | chr2:179475759;179475758;179475757 |
N2A | 14465 | 43618;43619;43620 | chr2:178611032;178611031;178611030 | chr2:179475759;179475758;179475757 |
N2B | 7968 | 24127;24128;24129 | chr2:178611032;178611031;178611030 | chr2:179475759;179475758;179475757 |
Novex-1 | 8093 | 24502;24503;24504 | chr2:178611032;178611031;178611030 | chr2:179475759;179475758;179475757 |
Novex-2 | 8160 | 24703;24704;24705 | chr2:178611032;178611031;178611030 | chr2:179475759;179475758;179475757 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/V | None | None | 0.174 | N | 0.454 | 0.057 | 0.243972157842 | gnomAD-4.0.0 | 1.59379E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 2.77917E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.2364 | likely_benign | 0.2237 | benign | -0.467 | Destabilizing | 0.004 | N | 0.403 | neutral | None | None | None | None | I |
L/C | 0.5323 | ambiguous | 0.4557 | ambiguous | -0.759 | Destabilizing | 0.973 | D | 0.586 | neutral | None | None | None | None | I |
L/D | 0.7229 | likely_pathogenic | 0.6899 | pathogenic | -0.266 | Destabilizing | 0.704 | D | 0.614 | neutral | None | None | None | None | I |
L/E | 0.4426 | ambiguous | 0.4223 | ambiguous | -0.365 | Destabilizing | 0.826 | D | 0.605 | neutral | None | None | None | None | I |
L/F | 0.1804 | likely_benign | 0.1797 | benign | -0.623 | Destabilizing | 0.782 | D | 0.446 | neutral | N | 0.511387921 | None | None | I |
L/G | 0.5663 | likely_pathogenic | 0.51 | ambiguous | -0.574 | Destabilizing | 0.404 | N | 0.582 | neutral | None | None | None | None | I |
L/H | 0.2769 | likely_benign | 0.2351 | benign | 0.083 | Stabilizing | 0.965 | D | 0.647 | neutral | N | 0.517194395 | None | None | I |
L/I | 0.1098 | likely_benign | 0.111 | benign | -0.308 | Destabilizing | 0.007 | N | 0.288 | neutral | N | 0.506839445 | None | None | I |
L/K | 0.3919 | ambiguous | 0.3549 | ambiguous | -0.342 | Destabilizing | 0.826 | D | 0.562 | neutral | None | None | None | None | I |
L/M | 0.1285 | likely_benign | 0.13 | benign | -0.533 | Destabilizing | 0.826 | D | 0.465 | neutral | None | None | None | None | I |
L/N | 0.3701 | ambiguous | 0.3706 | ambiguous | -0.194 | Destabilizing | 0.018 | N | 0.495 | neutral | None | None | None | None | I |
L/P | 0.7786 | likely_pathogenic | 0.6958 | pathogenic | -0.332 | Destabilizing | 0.879 | D | 0.639 | neutral | D | 0.689580296 | None | None | I |
L/Q | 0.2046 | likely_benign | 0.176 | benign | -0.395 | Destabilizing | 0.906 | D | 0.625 | neutral | None | None | None | None | I |
L/R | 0.3046 | likely_benign | 0.2427 | benign | 0.162 | Stabilizing | 0.782 | D | 0.625 | neutral | D | 0.626594814 | None | None | I |
L/S | 0.3082 | likely_benign | 0.2832 | benign | -0.58 | Destabilizing | 0.404 | N | 0.585 | neutral | None | None | None | None | I |
L/T | 0.2481 | likely_benign | 0.2388 | benign | -0.576 | Destabilizing | 0.575 | D | 0.517 | neutral | None | None | None | None | I |
L/V | 0.1242 | likely_benign | 0.121 | benign | -0.332 | Destabilizing | 0.174 | N | 0.454 | neutral | N | 0.503908881 | None | None | I |
L/W | 0.3344 | likely_benign | 0.2451 | benign | -0.641 | Destabilizing | 0.991 | D | 0.682 | prob.neutral | None | None | None | None | I |
L/Y | 0.3723 | ambiguous | 0.3489 | ambiguous | -0.399 | Destabilizing | 0.967 | D | 0.54 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.