Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17035 | 51328;51329;51330 | chr2:178611026;178611025;178611024 | chr2:179475753;179475752;179475751 |
N2AB | 15394 | 46405;46406;46407 | chr2:178611026;178611025;178611024 | chr2:179475753;179475752;179475751 |
N2A | 14467 | 43624;43625;43626 | chr2:178611026;178611025;178611024 | chr2:179475753;179475752;179475751 |
N2B | 7970 | 24133;24134;24135 | chr2:178611026;178611025;178611024 | chr2:179475753;179475752;179475751 |
Novex-1 | 8095 | 24508;24509;24510 | chr2:178611026;178611025;178611024 | chr2:179475753;179475752;179475751 |
Novex-2 | 8162 | 24709;24710;24711 | chr2:178611026;178611025;178611024 | chr2:179475753;179475752;179475751 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/P | None | None | 0.988 | D | 0.438 | 0.503 | 0.344483371355 | gnomAD-4.0.0 | 1.59388E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 2.77917E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0702 | likely_benign | 0.0747 | benign | -0.427 | Destabilizing | 0.061 | N | 0.143 | neutral | N | 0.512313459 | None | None | I |
S/C | 0.1092 | likely_benign | 0.107 | benign | -0.316 | Destabilizing | 0.999 | D | 0.467 | neutral | None | None | None | None | I |
S/D | 0.4364 | ambiguous | 0.4528 | ambiguous | -0.175 | Destabilizing | 0.969 | D | 0.358 | neutral | None | None | None | None | I |
S/E | 0.4218 | ambiguous | 0.4221 | ambiguous | -0.272 | Destabilizing | 0.969 | D | 0.365 | neutral | None | None | None | None | I |
S/F | 0.1616 | likely_benign | 0.1621 | benign | -0.973 | Destabilizing | 0.982 | D | 0.566 | neutral | None | None | None | None | I |
S/G | 0.1093 | likely_benign | 0.1112 | benign | -0.542 | Destabilizing | 0.884 | D | 0.298 | neutral | None | None | None | None | I |
S/H | 0.2947 | likely_benign | 0.2827 | benign | -1.056 | Destabilizing | 0.999 | D | 0.468 | neutral | None | None | None | None | I |
S/I | 0.1262 | likely_benign | 0.139 | benign | -0.249 | Destabilizing | 0.964 | D | 0.509 | neutral | None | None | None | None | I |
S/K | 0.448 | ambiguous | 0.4544 | ambiguous | -0.602 | Destabilizing | 0.939 | D | 0.363 | neutral | None | None | None | None | I |
S/L | 0.0811 | likely_benign | 0.0859 | benign | -0.249 | Destabilizing | 0.704 | D | 0.487 | neutral | D | 0.630674818 | None | None | I |
S/M | 0.1497 | likely_benign | 0.1626 | benign | 0.087 | Stabilizing | 0.759 | D | 0.403 | neutral | None | None | None | None | I |
S/N | 0.1303 | likely_benign | 0.1423 | benign | -0.307 | Destabilizing | 0.969 | D | 0.408 | neutral | None | None | None | None | I |
S/P | 0.5966 | likely_pathogenic | 0.571 | pathogenic | -0.28 | Destabilizing | 0.988 | D | 0.438 | neutral | D | 0.544227077 | None | None | I |
S/Q | 0.3856 | ambiguous | 0.3844 | ambiguous | -0.628 | Destabilizing | 0.991 | D | 0.405 | neutral | None | None | None | None | I |
S/R | 0.4407 | ambiguous | 0.4217 | ambiguous | -0.318 | Destabilizing | 0.991 | D | 0.452 | neutral | None | None | None | None | I |
S/T | 0.0677 | likely_benign | 0.0709 | benign | -0.411 | Destabilizing | 0.134 | N | 0.176 | neutral | N | 0.513654969 | None | None | I |
S/V | 0.1314 | likely_benign | 0.1452 | benign | -0.28 | Destabilizing | 0.884 | D | 0.509 | neutral | None | None | None | None | I |
S/W | 0.391 | ambiguous | 0.3443 | ambiguous | -0.95 | Destabilizing | 0.999 | D | 0.62 | neutral | None | None | None | None | I |
S/Y | 0.1911 | likely_benign | 0.1796 | benign | -0.692 | Destabilizing | 0.997 | D | 0.569 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.