Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17037 | 51334;51335;51336 | chr2:178611020;178611019;178611018 | chr2:179475747;179475746;179475745 |
N2AB | 15396 | 46411;46412;46413 | chr2:178611020;178611019;178611018 | chr2:179475747;179475746;179475745 |
N2A | 14469 | 43630;43631;43632 | chr2:178611020;178611019;178611018 | chr2:179475747;179475746;179475745 |
N2B | 7972 | 24139;24140;24141 | chr2:178611020;178611019;178611018 | chr2:179475747;179475746;179475745 |
Novex-1 | 8097 | 24514;24515;24516 | chr2:178611020;178611019;178611018 | chr2:179475747;179475746;179475745 |
Novex-2 | 8164 | 24715;24716;24717 | chr2:178611020;178611019;178611018 | chr2:179475747;179475746;179475745 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/K | None | None | 0.994 | N | 0.709 | 0.394 | 0.484400871567 | gnomAD-4.0.0 | 1.594E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43513E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0838 | likely_benign | 0.0896 | benign | -0.474 | Destabilizing | 0.9 | D | 0.455 | neutral | N | 0.513674547 | None | None | N |
T/C | 0.5246 | ambiguous | 0.5576 | ambiguous | -0.319 | Destabilizing | 1.0 | D | 0.703 | prob.neutral | None | None | None | None | N |
T/D | 0.4246 | ambiguous | 0.476 | ambiguous | 0.299 | Stabilizing | 0.995 | D | 0.703 | prob.neutral | None | None | None | None | N |
T/E | 0.2947 | likely_benign | 0.3128 | benign | 0.236 | Stabilizing | 0.995 | D | 0.709 | prob.delet. | None | None | None | None | N |
T/F | 0.3278 | likely_benign | 0.383 | ambiguous | -0.926 | Destabilizing | 0.999 | D | 0.75 | deleterious | None | None | None | None | N |
T/G | 0.298 | likely_benign | 0.3153 | benign | -0.621 | Destabilizing | 0.983 | D | 0.588 | neutral | None | None | None | None | N |
T/H | 0.2939 | likely_benign | 0.3099 | benign | -0.936 | Destabilizing | 1.0 | D | 0.727 | prob.delet. | None | None | None | None | N |
T/I | 0.2131 | likely_benign | 0.2493 | benign | -0.202 | Destabilizing | 0.997 | D | 0.747 | deleterious | D | 0.542148152 | None | None | N |
T/K | 0.1733 | likely_benign | 0.1872 | benign | -0.351 | Destabilizing | 0.994 | D | 0.709 | prob.delet. | N | 0.515083035 | None | None | N |
T/L | 0.1554 | likely_benign | 0.1738 | benign | -0.202 | Destabilizing | 0.992 | D | 0.59 | neutral | None | None | None | None | N |
T/M | 0.1145 | likely_benign | 0.1183 | benign | -0.028 | Destabilizing | 1.0 | D | 0.706 | prob.neutral | None | None | None | None | N |
T/N | 0.1506 | likely_benign | 0.1694 | benign | -0.164 | Destabilizing | 0.995 | D | 0.593 | neutral | None | None | None | None | N |
T/P | 0.3493 | ambiguous | 0.4003 | ambiguous | -0.264 | Destabilizing | 0.997 | D | 0.749 | deleterious | D | 0.550818857 | None | None | N |
T/Q | 0.2187 | likely_benign | 0.223 | benign | -0.374 | Destabilizing | 0.998 | D | 0.747 | deleterious | None | None | None | None | N |
T/R | 0.1779 | likely_benign | 0.1826 | benign | -0.121 | Destabilizing | 0.997 | D | 0.749 | deleterious | N | 0.508727303 | None | None | N |
T/S | 0.1076 | likely_benign | 0.1136 | benign | -0.414 | Destabilizing | 0.63 | D | 0.267 | neutral | N | 0.455969967 | None | None | N |
T/V | 0.1551 | likely_benign | 0.1717 | benign | -0.264 | Destabilizing | 0.992 | D | 0.479 | neutral | None | None | None | None | N |
T/W | 0.7569 | likely_pathogenic | 0.7927 | pathogenic | -0.903 | Destabilizing | 1.0 | D | 0.712 | prob.delet. | None | None | None | None | N |
T/Y | 0.4105 | ambiguous | 0.4644 | ambiguous | -0.622 | Destabilizing | 0.999 | D | 0.753 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.