Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17043 | 51352;51353;51354 | chr2:178611002;178611001;178611000 | chr2:179475729;179475728;179475727 |
N2AB | 15402 | 46429;46430;46431 | chr2:178611002;178611001;178611000 | chr2:179475729;179475728;179475727 |
N2A | 14475 | 43648;43649;43650 | chr2:178611002;178611001;178611000 | chr2:179475729;179475728;179475727 |
N2B | 7978 | 24157;24158;24159 | chr2:178611002;178611001;178611000 | chr2:179475729;179475728;179475727 |
Novex-1 | 8103 | 24532;24533;24534 | chr2:178611002;178611001;178611000 | chr2:179475729;179475728;179475727 |
Novex-2 | 8170 | 24733;24734;24735 | chr2:178611002;178611001;178611000 | chr2:179475729;179475728;179475727 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/Q | rs794729269 | None | 0.975 | N | 0.694 | 0.358 | None | gnomAD-4.0.0 | 4.10937E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.40056E-06 | 0 | 0 |
K/R | rs758910983 | -0.006 | 0.787 | N | 0.589 | 0.273 | 0.407357902709 | gnomAD-2.1.1 | 8.07E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 6.61E-05 | None | 0 | 0 | 0 |
K/R | rs758910983 | -0.006 | 0.787 | N | 0.589 | 0.273 | 0.407357902709 | gnomAD-4.0.0 | 2.73967E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.80024E-06 | 2.32683E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.6134 | likely_pathogenic | 0.5813 | pathogenic | -0.584 | Destabilizing | 0.547 | D | 0.606 | neutral | None | None | None | None | N |
K/C | 0.8568 | likely_pathogenic | 0.8341 | pathogenic | -0.615 | Destabilizing | 0.985 | D | 0.755 | deleterious | None | None | None | None | N |
K/D | 0.792 | likely_pathogenic | 0.7794 | pathogenic | -0.135 | Destabilizing | 0.945 | D | 0.724 | prob.delet. | None | None | None | None | N |
K/E | 0.3399 | likely_benign | 0.3386 | benign | -0.005 | Destabilizing | 0.787 | D | 0.588 | neutral | N | 0.510708286 | None | None | N |
K/F | 0.9164 | likely_pathogenic | 0.9133 | pathogenic | -0.141 | Destabilizing | 0.894 | D | 0.757 | deleterious | None | None | None | None | N |
K/G | 0.8235 | likely_pathogenic | 0.8036 | pathogenic | -0.976 | Destabilizing | 0.945 | D | 0.645 | neutral | None | None | None | None | N |
K/H | 0.3839 | ambiguous | 0.3622 | ambiguous | -1.264 | Destabilizing | 0.995 | D | 0.673 | neutral | None | None | None | None | N |
K/I | 0.5186 | ambiguous | 0.5091 | ambiguous | 0.441 | Stabilizing | 0.523 | D | 0.673 | neutral | N | 0.514093262 | None | None | N |
K/L | 0.5785 | likely_pathogenic | 0.5554 | ambiguous | 0.441 | Stabilizing | 0.547 | D | 0.622 | neutral | None | None | None | None | N |
K/M | 0.3662 | ambiguous | 0.3424 | ambiguous | 0.237 | Stabilizing | 0.97 | D | 0.677 | prob.neutral | None | None | None | None | N |
K/N | 0.5497 | ambiguous | 0.5466 | ambiguous | -0.57 | Destabilizing | 0.975 | D | 0.683 | prob.neutral | N | 0.50658342 | None | None | N |
K/P | 0.9837 | likely_pathogenic | 0.9785 | pathogenic | 0.13 | Stabilizing | 0.981 | D | 0.731 | prob.delet. | None | None | None | None | N |
K/Q | 0.1994 | likely_benign | 0.1928 | benign | -0.577 | Destabilizing | 0.975 | D | 0.694 | prob.neutral | N | 0.510231113 | None | None | N |
K/R | 0.1117 | likely_benign | 0.1082 | benign | -0.717 | Destabilizing | 0.787 | D | 0.589 | neutral | N | 0.501031843 | None | None | N |
K/S | 0.6142 | likely_pathogenic | 0.601 | pathogenic | -1.222 | Destabilizing | 0.707 | D | 0.633 | neutral | None | None | None | None | N |
K/T | 0.2309 | likely_benign | 0.2181 | benign | -0.876 | Destabilizing | 0.864 | D | 0.688 | prob.neutral | N | 0.470095542 | None | None | N |
K/V | 0.4958 | ambiguous | 0.4707 | ambiguous | 0.13 | Stabilizing | 0.017 | N | 0.484 | neutral | None | None | None | None | N |
K/W | 0.9113 | likely_pathogenic | 0.9013 | pathogenic | -0.028 | Destabilizing | 0.995 | D | 0.761 | deleterious | None | None | None | None | N |
K/Y | 0.8355 | likely_pathogenic | 0.8255 | pathogenic | 0.244 | Stabilizing | 0.945 | D | 0.738 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.