Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17047 | 51364;51365;51366 | chr2:178610387;178610386;178610385 | chr2:179475114;179475113;179475112 |
N2AB | 15406 | 46441;46442;46443 | chr2:178610387;178610386;178610385 | chr2:179475114;179475113;179475112 |
N2A | 14479 | 43660;43661;43662 | chr2:178610387;178610386;178610385 | chr2:179475114;179475113;179475112 |
N2B | 7982 | 24169;24170;24171 | chr2:178610387;178610386;178610385 | chr2:179475114;179475113;179475112 |
Novex-1 | 8107 | 24544;24545;24546 | chr2:178610387;178610386;178610385 | chr2:179475114;179475113;179475112 |
Novex-2 | 8174 | 24745;24746;24747 | chr2:178610387;178610386;178610385 | chr2:179475114;179475113;179475112 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/I | None | None | 0.976 | N | 0.474 | 0.141 | 0.423836183345 | gnomAD-4.0.0 | 1.20034E-06 | None | None | None | None | I | None | 6.33553E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.2725 | likely_benign | 0.2693 | benign | -0.654 | Destabilizing | 0.963 | D | 0.497 | neutral | None | None | None | None | I |
L/C | 0.5623 | ambiguous | 0.5304 | ambiguous | -0.722 | Destabilizing | 1.0 | D | 0.62 | neutral | None | None | None | None | I |
L/D | 0.7456 | likely_pathogenic | 0.7569 | pathogenic | 0.186 | Stabilizing | 0.995 | D | 0.791 | deleterious | None | None | None | None | I |
L/E | 0.4265 | ambiguous | 0.4209 | ambiguous | 0.105 | Stabilizing | 0.989 | D | 0.765 | deleterious | None | None | None | None | I |
L/F | 0.2205 | likely_benign | 0.2098 | benign | -0.596 | Destabilizing | 0.998 | D | 0.575 | neutral | None | None | None | None | I |
L/G | 0.6348 | likely_pathogenic | 0.6313 | pathogenic | -0.82 | Destabilizing | 0.989 | D | 0.773 | deleterious | None | None | None | None | I |
L/H | 0.3036 | likely_benign | 0.2763 | benign | -0.046 | Destabilizing | 1.0 | D | 0.799 | deleterious | None | None | None | None | I |
L/I | 0.1183 | likely_benign | 0.1187 | benign | -0.342 | Destabilizing | 0.976 | D | 0.474 | neutral | N | 0.452265345 | None | None | I |
L/K | 0.2364 | likely_benign | 0.2198 | benign | -0.222 | Destabilizing | 0.989 | D | 0.773 | deleterious | None | None | None | None | I |
L/M | 0.144 | likely_benign | 0.1416 | benign | -0.394 | Destabilizing | 0.998 | D | 0.591 | neutral | None | None | None | None | I |
L/N | 0.3807 | ambiguous | 0.4082 | ambiguous | -0.08 | Destabilizing | 0.995 | D | 0.818 | deleterious | None | None | None | None | I |
L/P | 0.1863 | likely_benign | 0.1967 | benign | -0.412 | Destabilizing | 0.125 | N | 0.471 | neutral | N | 0.44096066 | None | None | I |
L/Q | 0.1814 | likely_benign | 0.167 | benign | -0.288 | Destabilizing | 0.993 | D | 0.828 | deleterious | N | 0.447186575 | None | None | I |
L/R | 0.2336 | likely_benign | 0.2006 | benign | 0.288 | Stabilizing | 0.993 | D | 0.821 | deleterious | N | 0.427293596 | None | None | I |
L/S | 0.3102 | likely_benign | 0.3222 | benign | -0.622 | Destabilizing | 0.989 | D | 0.762 | deleterious | None | None | None | None | I |
L/T | 0.2353 | likely_benign | 0.2333 | benign | -0.591 | Destabilizing | 0.995 | D | 0.607 | neutral | None | None | None | None | I |
L/V | 0.1179 | likely_benign | 0.1109 | benign | -0.412 | Destabilizing | 0.976 | D | 0.407 | neutral | N | 0.440302787 | None | None | I |
L/W | 0.5058 | ambiguous | 0.4595 | ambiguous | -0.572 | Destabilizing | 1.0 | D | 0.773 | deleterious | None | None | None | None | I |
L/Y | 0.4462 | ambiguous | 0.4294 | ambiguous | -0.321 | Destabilizing | 0.998 | D | 0.669 | prob.neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.