Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17056 | 51391;51392;51393 | chr2:178610360;178610359;178610358 | chr2:179475087;179475086;179475085 |
N2AB | 15415 | 46468;46469;46470 | chr2:178610360;178610359;178610358 | chr2:179475087;179475086;179475085 |
N2A | 14488 | 43687;43688;43689 | chr2:178610360;178610359;178610358 | chr2:179475087;179475086;179475085 |
N2B | 7991 | 24196;24197;24198 | chr2:178610360;178610359;178610358 | chr2:179475087;179475086;179475085 |
Novex-1 | 8116 | 24571;24572;24573 | chr2:178610360;178610359;178610358 | chr2:179475087;179475086;179475085 |
Novex-2 | 8183 | 24772;24773;24774 | chr2:178610360;178610359;178610358 | chr2:179475087;179475086;179475085 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/E | rs747241356 | -0.784 | 0.999 | D | 0.79 | 0.406 | 0.619842255389 | gnomAD-2.1.1 | 8.06E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 6.54E-05 | None | 0 | 0 | 0 |
A/E | rs747241356 | -0.784 | 0.999 | D | 0.79 | 0.406 | 0.619842255389 | gnomAD-4.0.0 | 4.10808E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99941E-07 | 5.80019E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.5612 | ambiguous | 0.599 | pathogenic | -0.841 | Destabilizing | 1.0 | D | 0.755 | deleterious | None | None | None | None | N |
A/D | 0.9091 | likely_pathogenic | 0.9044 | pathogenic | -0.528 | Destabilizing | 0.999 | D | 0.859 | deleterious | None | None | None | None | N |
A/E | 0.8554 | likely_pathogenic | 0.863 | pathogenic | -0.583 | Destabilizing | 0.999 | D | 0.79 | deleterious | D | 0.536929611 | None | None | N |
A/F | 0.6772 | likely_pathogenic | 0.6906 | pathogenic | -0.747 | Destabilizing | 1.0 | D | 0.877 | deleterious | None | None | None | None | N |
A/G | 0.261 | likely_benign | 0.2851 | benign | -0.756 | Destabilizing | 0.996 | D | 0.607 | neutral | D | 0.601950174 | None | None | N |
A/H | 0.8893 | likely_pathogenic | 0.891 | pathogenic | -0.799 | Destabilizing | 1.0 | D | 0.846 | deleterious | None | None | None | None | N |
A/I | 0.3633 | ambiguous | 0.3777 | ambiguous | -0.155 | Destabilizing | 1.0 | D | 0.834 | deleterious | None | None | None | None | N |
A/K | 0.9525 | likely_pathogenic | 0.9559 | pathogenic | -0.92 | Destabilizing | 0.999 | D | 0.793 | deleterious | None | None | None | None | N |
A/L | 0.4178 | ambiguous | 0.4278 | ambiguous | -0.155 | Destabilizing | 0.998 | D | 0.757 | deleterious | None | None | None | None | N |
A/M | 0.4835 | ambiguous | 0.4941 | ambiguous | -0.317 | Destabilizing | 1.0 | D | 0.799 | deleterious | None | None | None | None | N |
A/N | 0.7505 | likely_pathogenic | 0.7623 | pathogenic | -0.665 | Destabilizing | 0.999 | D | 0.869 | deleterious | None | None | None | None | N |
A/P | 0.1895 | likely_benign | 0.2414 | benign | -0.245 | Destabilizing | 0.999 | D | 0.839 | deleterious | N | 0.49077398 | None | None | N |
A/Q | 0.8423 | likely_pathogenic | 0.8503 | pathogenic | -0.794 | Destabilizing | 1.0 | D | 0.839 | deleterious | None | None | None | None | N |
A/R | 0.9396 | likely_pathogenic | 0.9398 | pathogenic | -0.588 | Destabilizing | 1.0 | D | 0.835 | deleterious | None | None | None | None | N |
A/S | 0.1873 | likely_benign | 0.199 | benign | -1.002 | Destabilizing | 0.957 | D | 0.385 | neutral | N | 0.484594738 | None | None | N |
A/T | 0.1934 | likely_benign | 0.2045 | benign | -0.946 | Destabilizing | 0.992 | D | 0.673 | neutral | N | 0.518984083 | None | None | N |
A/V | 0.1791 | likely_benign | 0.183 | benign | -0.245 | Destabilizing | 0.998 | D | 0.678 | prob.neutral | N | 0.422091778 | None | None | N |
A/W | 0.9464 | likely_pathogenic | 0.9524 | pathogenic | -1.027 | Destabilizing | 1.0 | D | 0.819 | deleterious | None | None | None | None | N |
A/Y | 0.7938 | likely_pathogenic | 0.8072 | pathogenic | -0.621 | Destabilizing | 1.0 | D | 0.863 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.