Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17060 | 51403;51404;51405 | chr2:178610348;178610347;178610346 | chr2:179475075;179475074;179475073 |
N2AB | 15419 | 46480;46481;46482 | chr2:178610348;178610347;178610346 | chr2:179475075;179475074;179475073 |
N2A | 14492 | 43699;43700;43701 | chr2:178610348;178610347;178610346 | chr2:179475075;179475074;179475073 |
N2B | 7995 | 24208;24209;24210 | chr2:178610348;178610347;178610346 | chr2:179475075;179475074;179475073 |
Novex-1 | 8120 | 24583;24584;24585 | chr2:178610348;178610347;178610346 | chr2:179475075;179475074;179475073 |
Novex-2 | 8187 | 24784;24785;24786 | chr2:178610348;178610347;178610346 | chr2:179475075;179475074;179475073 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/N | None | None | 1.0 | N | 0.765 | 0.362 | 0.432041664125 | gnomAD-4.0.0 | 1.5936E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86277E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.4014 | ambiguous | 0.399 | ambiguous | -0.738 | Destabilizing | 0.999 | D | 0.509 | neutral | D | 0.539614957 | None | None | N |
T/C | 0.7453 | likely_pathogenic | 0.741 | pathogenic | -0.594 | Destabilizing | 1.0 | D | 0.685 | prob.neutral | None | None | None | None | N |
T/D | 0.8163 | likely_pathogenic | 0.829 | pathogenic | -1.019 | Destabilizing | 1.0 | D | 0.767 | deleterious | None | None | None | None | N |
T/E | 0.8505 | likely_pathogenic | 0.8709 | pathogenic | -1.019 | Destabilizing | 1.0 | D | 0.777 | deleterious | None | None | None | None | N |
T/F | 0.8319 | likely_pathogenic | 0.8341 | pathogenic | -0.992 | Destabilizing | 1.0 | D | 0.763 | deleterious | None | None | None | None | N |
T/G | 0.3897 | ambiguous | 0.3816 | ambiguous | -0.975 | Destabilizing | 1.0 | D | 0.724 | prob.delet. | None | None | None | None | N |
T/H | 0.6479 | likely_pathogenic | 0.6731 | pathogenic | -1.404 | Destabilizing | 1.0 | D | 0.702 | prob.neutral | None | None | None | None | N |
T/I | 0.8341 | likely_pathogenic | 0.8713 | pathogenic | -0.2 | Destabilizing | 1.0 | D | 0.757 | deleterious | D | 0.654594955 | None | None | N |
T/K | 0.6715 | likely_pathogenic | 0.7026 | pathogenic | -0.787 | Destabilizing | 1.0 | D | 0.775 | deleterious | None | None | None | None | N |
T/L | 0.3983 | ambiguous | 0.4315 | ambiguous | -0.2 | Destabilizing | 0.999 | D | 0.667 | neutral | None | None | None | None | N |
T/M | 0.3351 | likely_benign | 0.356 | ambiguous | 0.254 | Stabilizing | 1.0 | D | 0.699 | prob.neutral | None | None | None | None | N |
T/N | 0.3019 | likely_benign | 0.3288 | benign | -0.892 | Destabilizing | 1.0 | D | 0.765 | deleterious | N | 0.46906868 | None | None | N |
T/P | 0.9181 | likely_pathogenic | 0.9168 | pathogenic | -0.349 | Destabilizing | 1.0 | D | 0.739 | prob.delet. | D | 0.677020553 | None | None | N |
T/Q | 0.5455 | ambiguous | 0.5811 | pathogenic | -1.149 | Destabilizing | 1.0 | D | 0.762 | deleterious | None | None | None | None | N |
T/R | 0.6704 | likely_pathogenic | 0.676 | pathogenic | -0.515 | Destabilizing | 1.0 | D | 0.748 | deleterious | None | None | None | None | N |
T/S | 0.1697 | likely_benign | 0.1664 | benign | -1.038 | Destabilizing | 0.999 | D | 0.539 | neutral | N | 0.483702079 | None | None | N |
T/V | 0.6411 | likely_pathogenic | 0.6817 | pathogenic | -0.349 | Destabilizing | 0.999 | D | 0.607 | neutral | None | None | None | None | N |
T/W | 0.9615 | likely_pathogenic | 0.9632 | pathogenic | -0.98 | Destabilizing | 1.0 | D | 0.695 | prob.neutral | None | None | None | None | N |
T/Y | 0.8514 | likely_pathogenic | 0.8555 | pathogenic | -0.686 | Destabilizing | 1.0 | D | 0.759 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.