Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17066 | 51421;51422;51423 | chr2:178610330;178610329;178610328 | chr2:179475057;179475056;179475055 |
N2AB | 15425 | 46498;46499;46500 | chr2:178610330;178610329;178610328 | chr2:179475057;179475056;179475055 |
N2A | 14498 | 43717;43718;43719 | chr2:178610330;178610329;178610328 | chr2:179475057;179475056;179475055 |
N2B | 8001 | 24226;24227;24228 | chr2:178610330;178610329;178610328 | chr2:179475057;179475056;179475055 |
Novex-1 | 8126 | 24601;24602;24603 | chr2:178610330;178610329;178610328 | chr2:179475057;179475056;179475055 |
Novex-2 | 8193 | 24802;24803;24804 | chr2:178610330;178610329;178610328 | chr2:179475057;179475056;179475055 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/S | None | None | 0.984 | D | 0.815 | 0.646 | 0.828760804546 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.66327E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.9388 | likely_pathogenic | 0.942 | pathogenic | -2.593 | Highly Destabilizing | 0.702 | D | 0.739 | prob.delet. | None | None | None | None | N |
L/C | 0.9174 | likely_pathogenic | 0.9276 | pathogenic | -2.06 | Highly Destabilizing | 0.999 | D | 0.795 | deleterious | None | None | None | None | N |
L/D | 0.9996 | likely_pathogenic | 0.9996 | pathogenic | -2.978 | Highly Destabilizing | 0.996 | D | 0.896 | deleterious | None | None | None | None | N |
L/E | 0.997 | likely_pathogenic | 0.9972 | pathogenic | -2.651 | Highly Destabilizing | 0.988 | D | 0.885 | deleterious | None | None | None | None | N |
L/F | 0.758 | likely_pathogenic | 0.7675 | pathogenic | -1.558 | Destabilizing | 0.968 | D | 0.708 | prob.delet. | D | 0.668578198 | None | None | N |
L/G | 0.9924 | likely_pathogenic | 0.9928 | pathogenic | -3.237 | Highly Destabilizing | 0.988 | D | 0.873 | deleterious | None | None | None | None | N |
L/H | 0.9952 | likely_pathogenic | 0.9957 | pathogenic | -2.94 | Highly Destabilizing | 0.999 | D | 0.902 | deleterious | None | None | None | None | N |
L/I | 0.0916 | likely_benign | 0.1035 | benign | -0.676 | Destabilizing | 0.103 | N | 0.306 | neutral | N | 0.494490341 | None | None | N |
L/K | 0.9965 | likely_pathogenic | 0.9971 | pathogenic | -1.931 | Destabilizing | 0.988 | D | 0.834 | deleterious | None | None | None | None | N |
L/M | 0.2948 | likely_benign | 0.3279 | benign | -0.902 | Destabilizing | 0.988 | D | 0.673 | neutral | None | None | None | None | N |
L/N | 0.9966 | likely_pathogenic | 0.9969 | pathogenic | -2.568 | Highly Destabilizing | 0.996 | D | 0.9 | deleterious | None | None | None | None | N |
L/P | 0.9967 | likely_pathogenic | 0.997 | pathogenic | -1.302 | Destabilizing | 0.996 | D | 0.895 | deleterious | None | None | None | None | N |
L/Q | 0.9923 | likely_pathogenic | 0.9931 | pathogenic | -2.208 | Highly Destabilizing | 0.996 | D | 0.876 | deleterious | None | None | None | None | N |
L/R | 0.9945 | likely_pathogenic | 0.9948 | pathogenic | -2.031 | Highly Destabilizing | 0.988 | D | 0.866 | deleterious | None | None | None | None | N |
L/S | 0.9954 | likely_pathogenic | 0.9961 | pathogenic | -3.271 | Highly Destabilizing | 0.984 | D | 0.815 | deleterious | D | 0.746855905 | None | None | N |
L/T | 0.9653 | likely_pathogenic | 0.97 | pathogenic | -2.76 | Highly Destabilizing | 0.919 | D | 0.75 | deleterious | None | None | None | None | N |
L/V | 0.1105 | likely_benign | 0.1219 | benign | -1.302 | Destabilizing | 0.011 | N | 0.305 | neutral | N | 0.480864345 | None | None | N |
L/W | 0.9876 | likely_pathogenic | 0.9885 | pathogenic | -1.941 | Destabilizing | 0.999 | D | 0.852 | deleterious | None | None | None | None | N |
L/Y | 0.9791 | likely_pathogenic | 0.9818 | pathogenic | -1.675 | Destabilizing | 0.988 | D | 0.777 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.