Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17069 | 51430;51431;51432 | chr2:178610321;178610320;178610319 | chr2:179475048;179475047;179475046 |
N2AB | 15428 | 46507;46508;46509 | chr2:178610321;178610320;178610319 | chr2:179475048;179475047;179475046 |
N2A | 14501 | 43726;43727;43728 | chr2:178610321;178610320;178610319 | chr2:179475048;179475047;179475046 |
N2B | 8004 | 24235;24236;24237 | chr2:178610321;178610320;178610319 | chr2:179475048;179475047;179475046 |
Novex-1 | 8129 | 24610;24611;24612 | chr2:178610321;178610320;178610319 | chr2:179475048;179475047;179475046 |
Novex-2 | 8196 | 24811;24812;24813 | chr2:178610321;178610320;178610319 | chr2:179475048;179475047;179475046 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/G | None | None | 0.994 | N | 0.672 | 0.511 | 0.399596177874 | gnomAD-4.0.0 | 1.59323E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 1.88253E-05 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2134 | likely_benign | 0.1905 | benign | -0.866 | Destabilizing | 0.994 | D | 0.643 | neutral | N | 0.485165153 | None | None | N |
E/C | 0.8311 | likely_pathogenic | 0.8712 | pathogenic | -0.485 | Destabilizing | 1.0 | D | 0.789 | deleterious | None | None | None | None | N |
E/D | 0.1221 | likely_benign | 0.1229 | benign | -1.01 | Destabilizing | 0.104 | N | 0.177 | neutral | N | 0.473648743 | None | None | N |
E/F | 0.7784 | likely_pathogenic | 0.8226 | pathogenic | -0.41 | Destabilizing | 1.0 | D | 0.774 | deleterious | None | None | None | None | N |
E/G | 0.2782 | likely_benign | 0.2628 | benign | -1.199 | Destabilizing | 0.994 | D | 0.672 | neutral | N | 0.484590882 | None | None | N |
E/H | 0.6155 | likely_pathogenic | 0.632 | pathogenic | -0.642 | Destabilizing | 1.0 | D | 0.642 | neutral | None | None | None | None | N |
E/I | 0.3811 | ambiguous | 0.3853 | ambiguous | 0.033 | Stabilizing | 1.0 | D | 0.79 | deleterious | None | None | None | None | N |
E/K | 0.322 | likely_benign | 0.326 | benign | -0.697 | Destabilizing | 0.994 | D | 0.501 | neutral | N | 0.458879787 | None | None | N |
E/L | 0.3926 | ambiguous | 0.3844 | ambiguous | 0.033 | Stabilizing | 1.0 | D | 0.783 | deleterious | None | None | None | None | N |
E/M | 0.4577 | ambiguous | 0.4552 | ambiguous | 0.427 | Stabilizing | 1.0 | D | 0.787 | deleterious | None | None | None | None | N |
E/N | 0.2528 | likely_benign | 0.2705 | benign | -1.044 | Destabilizing | 0.998 | D | 0.632 | neutral | None | None | None | None | N |
E/P | 0.9695 | likely_pathogenic | 0.9444 | pathogenic | -0.245 | Destabilizing | 1.0 | D | 0.779 | deleterious | None | None | None | None | N |
E/Q | 0.1892 | likely_benign | 0.1776 | benign | -0.931 | Destabilizing | 0.998 | D | 0.612 | neutral | N | 0.482607243 | None | None | N |
E/R | 0.5186 | ambiguous | 0.5282 | ambiguous | -0.384 | Destabilizing | 0.999 | D | 0.658 | neutral | None | None | None | None | N |
E/S | 0.2241 | likely_benign | 0.2214 | benign | -1.334 | Destabilizing | 0.992 | D | 0.526 | neutral | None | None | None | None | N |
E/T | 0.2482 | likely_benign | 0.2421 | benign | -1.068 | Destabilizing | 0.999 | D | 0.743 | deleterious | None | None | None | None | N |
E/V | 0.253 | likely_benign | 0.2404 | benign | -0.245 | Destabilizing | 0.999 | D | 0.768 | deleterious | N | 0.477775341 | None | None | N |
E/W | 0.9438 | likely_pathogenic | 0.9548 | pathogenic | -0.186 | Destabilizing | 1.0 | D | 0.785 | deleterious | None | None | None | None | N |
E/Y | 0.6811 | likely_pathogenic | 0.7334 | pathogenic | -0.187 | Destabilizing | 1.0 | D | 0.783 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.