Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17070 | 51433;51434;51435 | chr2:178610318;178610317;178610316 | chr2:179475045;179475044;179475043 |
N2AB | 15429 | 46510;46511;46512 | chr2:178610318;178610317;178610316 | chr2:179475045;179475044;179475043 |
N2A | 14502 | 43729;43730;43731 | chr2:178610318;178610317;178610316 | chr2:179475045;179475044;179475043 |
N2B | 8005 | 24238;24239;24240 | chr2:178610318;178610317;178610316 | chr2:179475045;179475044;179475043 |
Novex-1 | 8130 | 24613;24614;24615 | chr2:178610318;178610317;178610316 | chr2:179475045;179475044;179475043 |
Novex-2 | 8197 | 24814;24815;24816 | chr2:178610318;178610317;178610316 | chr2:179475045;179475044;179475043 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | None | None | 0.996 | N | 0.666 | 0.396 | 0.36076525451 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.087 | likely_benign | 0.0836 | benign | -1.684 | Destabilizing | 0.996 | D | 0.666 | neutral | N | 0.475356673 | None | None | N |
P/C | 0.6801 | likely_pathogenic | 0.6952 | pathogenic | -1.018 | Destabilizing | 1.0 | D | 0.882 | deleterious | None | None | None | None | N |
P/D | 0.7724 | likely_pathogenic | 0.7641 | pathogenic | -1.857 | Destabilizing | 1.0 | D | 0.859 | deleterious | None | None | None | None | N |
P/E | 0.4396 | ambiguous | 0.4332 | ambiguous | -1.786 | Destabilizing | 1.0 | D | 0.841 | deleterious | None | None | None | None | N |
P/F | 0.7156 | likely_pathogenic | 0.7173 | pathogenic | -1.225 | Destabilizing | 1.0 | D | 0.881 | deleterious | None | None | None | None | N |
P/G | 0.561 | ambiguous | 0.5477 | ambiguous | -2.038 | Highly Destabilizing | 1.0 | D | 0.791 | deleterious | None | None | None | None | N |
P/H | 0.4383 | ambiguous | 0.4281 | ambiguous | -1.477 | Destabilizing | 1.0 | D | 0.867 | deleterious | D | 0.63041492 | None | None | N |
P/I | 0.3687 | ambiguous | 0.3369 | benign | -0.771 | Destabilizing | 0.998 | D | 0.869 | deleterious | None | None | None | None | N |
P/K | 0.4821 | ambiguous | 0.4369 | ambiguous | -1.423 | Destabilizing | 1.0 | D | 0.834 | deleterious | None | None | None | None | N |
P/L | 0.161 | likely_benign | 0.1646 | benign | -0.771 | Destabilizing | 0.992 | D | 0.761 | deleterious | D | 0.596620026 | None | None | N |
P/M | 0.3037 | likely_benign | 0.2961 | benign | -0.654 | Destabilizing | 0.985 | D | 0.589 | neutral | None | None | None | None | N |
P/N | 0.5849 | likely_pathogenic | 0.5699 | pathogenic | -1.326 | Destabilizing | 1.0 | D | 0.882 | deleterious | None | None | None | None | N |
P/Q | 0.2713 | likely_benign | 0.2576 | benign | -1.42 | Destabilizing | 1.0 | D | 0.871 | deleterious | None | None | None | None | N |
P/R | 0.423 | ambiguous | 0.4044 | ambiguous | -0.952 | Destabilizing | 0.999 | D | 0.877 | deleterious | N | 0.514097196 | None | None | N |
P/S | 0.2368 | likely_benign | 0.2297 | benign | -1.794 | Destabilizing | 0.999 | D | 0.775 | deleterious | D | 0.575475538 | None | None | N |
P/T | 0.1922 | likely_benign | 0.1799 | benign | -1.606 | Destabilizing | 0.999 | D | 0.795 | deleterious | D | 0.560953986 | None | None | N |
P/V | 0.2531 | likely_benign | 0.2305 | benign | -1.046 | Destabilizing | 0.998 | D | 0.786 | deleterious | None | None | None | None | N |
P/W | 0.9139 | likely_pathogenic | 0.9186 | pathogenic | -1.459 | Destabilizing | 1.0 | D | 0.86 | deleterious | None | None | None | None | N |
P/Y | 0.7099 | likely_pathogenic | 0.7238 | pathogenic | -1.156 | Destabilizing | 1.0 | D | 0.873 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.