Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17079 | 51460;51461;51462 | chr2:178610291;178610290;178610289 | chr2:179475018;179475017;179475016 |
N2AB | 15438 | 46537;46538;46539 | chr2:178610291;178610290;178610289 | chr2:179475018;179475017;179475016 |
N2A | 14511 | 43756;43757;43758 | chr2:178610291;178610290;178610289 | chr2:179475018;179475017;179475016 |
N2B | 8014 | 24265;24266;24267 | chr2:178610291;178610290;178610289 | chr2:179475018;179475017;179475016 |
Novex-1 | 8139 | 24640;24641;24642 | chr2:178610291;178610290;178610289 | chr2:179475018;179475017;179475016 |
Novex-2 | 8206 | 24841;24842;24843 | chr2:178610291;178610290;178610289 | chr2:179475018;179475017;179475016 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/V | None | None | 0.4 | N | 0.228 | 0.104 | 0.455265801863 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | I | None | 6.33473E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.9779 | likely_pathogenic | 0.9764 | pathogenic | -2.546 | Highly Destabilizing | 0.985 | D | 0.701 | prob.neutral | None | None | None | None | I |
I/C | 0.9793 | likely_pathogenic | 0.9805 | pathogenic | -1.618 | Destabilizing | 1.0 | D | 0.754 | deleterious | None | None | None | None | I |
I/D | 0.9991 | likely_pathogenic | 0.9991 | pathogenic | -2.894 | Highly Destabilizing | 0.999 | D | 0.839 | deleterious | None | None | None | None | I |
I/E | 0.9969 | likely_pathogenic | 0.9969 | pathogenic | -2.75 | Highly Destabilizing | 0.999 | D | 0.836 | deleterious | None | None | None | None | I |
I/F | 0.9396 | likely_pathogenic | 0.9365 | pathogenic | -1.643 | Destabilizing | 0.994 | D | 0.691 | prob.neutral | D | 0.651955182 | None | None | I |
I/G | 0.9974 | likely_pathogenic | 0.9973 | pathogenic | -3.012 | Highly Destabilizing | 0.999 | D | 0.83 | deleterious | None | None | None | None | I |
I/H | 0.9974 | likely_pathogenic | 0.9971 | pathogenic | -2.446 | Highly Destabilizing | 1.0 | D | 0.817 | deleterious | None | None | None | None | I |
I/K | 0.995 | likely_pathogenic | 0.9946 | pathogenic | -2.009 | Highly Destabilizing | 0.999 | D | 0.835 | deleterious | None | None | None | None | I |
I/L | 0.3858 | ambiguous | 0.3923 | ambiguous | -1.226 | Destabilizing | 0.061 | N | 0.208 | neutral | D | 0.527551732 | None | None | I |
I/M | 0.6678 | likely_pathogenic | 0.6705 | pathogenic | -0.924 | Destabilizing | 0.994 | D | 0.687 | prob.neutral | D | 0.716566744 | None | None | I |
I/N | 0.9826 | likely_pathogenic | 0.9833 | pathogenic | -2.135 | Highly Destabilizing | 0.999 | D | 0.843 | deleterious | D | 0.718643762 | None | None | I |
I/P | 0.9837 | likely_pathogenic | 0.9789 | pathogenic | -1.645 | Destabilizing | 0.999 | D | 0.845 | deleterious | None | None | None | None | I |
I/Q | 0.9956 | likely_pathogenic | 0.9949 | pathogenic | -2.137 | Highly Destabilizing | 0.999 | D | 0.839 | deleterious | None | None | None | None | I |
I/R | 0.9928 | likely_pathogenic | 0.9921 | pathogenic | -1.5 | Destabilizing | 0.999 | D | 0.844 | deleterious | None | None | None | None | I |
I/S | 0.9845 | likely_pathogenic | 0.9841 | pathogenic | -2.747 | Highly Destabilizing | 0.997 | D | 0.805 | deleterious | D | 0.69494957 | None | None | I |
I/T | 0.9571 | likely_pathogenic | 0.9645 | pathogenic | -2.483 | Highly Destabilizing | 0.98 | D | 0.769 | deleterious | D | 0.656921779 | None | None | I |
I/V | 0.086 | likely_benign | 0.0973 | benign | -1.645 | Destabilizing | 0.4 | N | 0.228 | neutral | N | 0.484952299 | None | None | I |
I/W | 0.9991 | likely_pathogenic | 0.9989 | pathogenic | -2.036 | Highly Destabilizing | 1.0 | D | 0.794 | deleterious | None | None | None | None | I |
I/Y | 0.9935 | likely_pathogenic | 0.9932 | pathogenic | -1.79 | Destabilizing | 0.999 | D | 0.772 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.