Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17081 | 51466;51467;51468 | chr2:178610285;178610284;178610283 | chr2:179475012;179475011;179475010 |
N2AB | 15440 | 46543;46544;46545 | chr2:178610285;178610284;178610283 | chr2:179475012;179475011;179475010 |
N2A | 14513 | 43762;43763;43764 | chr2:178610285;178610284;178610283 | chr2:179475012;179475011;179475010 |
N2B | 8016 | 24271;24272;24273 | chr2:178610285;178610284;178610283 | chr2:179475012;179475011;179475010 |
Novex-1 | 8141 | 24646;24647;24648 | chr2:178610285;178610284;178610283 | chr2:179475012;179475011;179475010 |
Novex-2 | 8208 | 24847;24848;24849 | chr2:178610285;178610284;178610283 | chr2:179475012;179475011;179475010 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/P | None | None | 0.997 | D | 0.683 | 0.482 | 0.602375283534 | gnomAD-4.0.0 | 1.59302E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43349E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/A | 0.8461 | likely_pathogenic | 0.7555 | pathogenic | -1.474 | Destabilizing | 0.971 | D | 0.61 | neutral | None | None | None | None | N |
H/C | 0.5206 | ambiguous | 0.4167 | ambiguous | -0.702 | Destabilizing | 1.0 | D | 0.745 | deleterious | None | None | None | None | N |
H/D | 0.8374 | likely_pathogenic | 0.7763 | pathogenic | -1.047 | Destabilizing | 0.98 | D | 0.568 | neutral | N | 0.479050103 | None | None | N |
H/E | 0.9227 | likely_pathogenic | 0.8758 | pathogenic | -0.897 | Destabilizing | 0.985 | D | 0.422 | neutral | None | None | None | None | N |
H/F | 0.7619 | likely_pathogenic | 0.6837 | pathogenic | 0.065 | Stabilizing | 0.999 | D | 0.628 | neutral | None | None | None | None | N |
H/G | 0.7151 | likely_pathogenic | 0.5996 | pathogenic | -1.855 | Destabilizing | 0.985 | D | 0.593 | neutral | None | None | None | None | N |
H/I | 0.9761 | likely_pathogenic | 0.9576 | pathogenic | -0.38 | Destabilizing | 0.998 | D | 0.74 | deleterious | None | None | None | None | N |
H/K | 0.9049 | likely_pathogenic | 0.8417 | pathogenic | -1.093 | Destabilizing | 0.985 | D | 0.571 | neutral | None | None | None | None | N |
H/L | 0.7577 | likely_pathogenic | 0.6548 | pathogenic | -0.38 | Destabilizing | 0.997 | D | 0.69 | prob.neutral | N | 0.468898298 | None | None | N |
H/M | 0.942 | likely_pathogenic | 0.9063 | pathogenic | -0.564 | Destabilizing | 1.0 | D | 0.684 | prob.neutral | None | None | None | None | N |
H/N | 0.3396 | likely_benign | 0.2631 | benign | -1.383 | Destabilizing | 0.98 | D | 0.434 | neutral | N | 0.445780461 | None | None | N |
H/P | 0.9801 | likely_pathogenic | 0.9749 | pathogenic | -0.73 | Destabilizing | 0.997 | D | 0.683 | prob.neutral | D | 0.601166596 | None | None | N |
H/Q | 0.761 | likely_pathogenic | 0.6474 | pathogenic | -1.053 | Destabilizing | 0.997 | D | 0.468 | neutral | N | 0.474331153 | None | None | N |
H/R | 0.7077 | likely_pathogenic | 0.5765 | pathogenic | -1.311 | Destabilizing | 0.997 | D | 0.46 | neutral | N | 0.47790411 | None | None | N |
H/S | 0.5763 | likely_pathogenic | 0.4611 | ambiguous | -1.553 | Destabilizing | 0.719 | D | 0.335 | neutral | None | None | None | None | N |
H/T | 0.8786 | likely_pathogenic | 0.7941 | pathogenic | -1.3 | Destabilizing | 0.971 | D | 0.617 | neutral | None | None | None | None | N |
H/V | 0.954 | likely_pathogenic | 0.9183 | pathogenic | -0.73 | Destabilizing | 0.998 | D | 0.705 | prob.neutral | None | None | None | None | N |
H/W | 0.8541 | likely_pathogenic | 0.8086 | pathogenic | 0.518 | Stabilizing | 1.0 | D | 0.713 | prob.delet. | None | None | None | None | N |
H/Y | 0.3254 | likely_benign | 0.2564 | benign | 0.489 | Stabilizing | 0.997 | D | 0.468 | neutral | N | 0.473566421 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.