Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17088 | 51487;51488;51489 | chr2:178610264;178610263;178610262 | chr2:179474991;179474990;179474989 |
N2AB | 15447 | 46564;46565;46566 | chr2:178610264;178610263;178610262 | chr2:179474991;179474990;179474989 |
N2A | 14520 | 43783;43784;43785 | chr2:178610264;178610263;178610262 | chr2:179474991;179474990;179474989 |
N2B | 8023 | 24292;24293;24294 | chr2:178610264;178610263;178610262 | chr2:179474991;179474990;179474989 |
Novex-1 | 8148 | 24667;24668;24669 | chr2:178610264;178610263;178610262 | chr2:179474991;179474990;179474989 |
Novex-2 | 8215 | 24868;24869;24870 | chr2:178610264;178610263;178610262 | chr2:179474991;179474990;179474989 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/G | None | None | 1.0 | N | 0.715 | 0.545 | 0.486422812247 | gnomAD-4.0.0 | 6.84497E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99811E-07 | 0 | 0 |
E/Q | None | None | 1.0 | N | 0.628 | 0.347 | 0.478144874143 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.9338 | likely_pathogenic | 0.9142 | pathogenic | -0.741 | Destabilizing | 0.999 | D | 0.679 | prob.neutral | N | 0.479815482 | None | None | N |
E/C | 0.9978 | likely_pathogenic | 0.9969 | pathogenic | -0.453 | Destabilizing | 1.0 | D | 0.772 | deleterious | None | None | None | None | N |
E/D | 0.8242 | likely_pathogenic | 0.8135 | pathogenic | -1.117 | Destabilizing | 0.999 | D | 0.479 | neutral | N | 0.497818315 | None | None | N |
E/F | 0.9974 | likely_pathogenic | 0.9969 | pathogenic | 0.04 | Stabilizing | 1.0 | D | 0.798 | deleterious | None | None | None | None | N |
E/G | 0.9555 | likely_pathogenic | 0.9442 | pathogenic | -1.14 | Destabilizing | 1.0 | D | 0.715 | prob.delet. | N | 0.487412806 | None | None | N |
E/H | 0.9933 | likely_pathogenic | 0.991 | pathogenic | -0.208 | Destabilizing | 1.0 | D | 0.666 | neutral | None | None | None | None | N |
E/I | 0.9811 | likely_pathogenic | 0.9758 | pathogenic | 0.357 | Stabilizing | 1.0 | D | 0.827 | deleterious | None | None | None | None | N |
E/K | 0.9698 | likely_pathogenic | 0.9607 | pathogenic | -0.531 | Destabilizing | 0.999 | D | 0.597 | neutral | N | 0.517249438 | None | None | N |
E/L | 0.9809 | likely_pathogenic | 0.9769 | pathogenic | 0.357 | Stabilizing | 1.0 | D | 0.819 | deleterious | None | None | None | None | N |
E/M | 0.9824 | likely_pathogenic | 0.9786 | pathogenic | 0.736 | Stabilizing | 1.0 | D | 0.737 | prob.delet. | None | None | None | None | N |
E/N | 0.983 | likely_pathogenic | 0.9802 | pathogenic | -1.134 | Destabilizing | 1.0 | D | 0.723 | prob.delet. | None | None | None | None | N |
E/P | 0.9912 | likely_pathogenic | 0.9884 | pathogenic | 0.013 | Stabilizing | 1.0 | D | 0.804 | deleterious | None | None | None | None | N |
E/Q | 0.9072 | likely_pathogenic | 0.8773 | pathogenic | -0.961 | Destabilizing | 1.0 | D | 0.628 | neutral | N | 0.481497322 | None | None | N |
E/R | 0.9763 | likely_pathogenic | 0.9683 | pathogenic | -0.205 | Destabilizing | 1.0 | D | 0.718 | prob.delet. | None | None | None | None | N |
E/S | 0.9661 | likely_pathogenic | 0.9592 | pathogenic | -1.452 | Destabilizing | 0.999 | D | 0.645 | neutral | None | None | None | None | N |
E/T | 0.9756 | likely_pathogenic | 0.968 | pathogenic | -1.111 | Destabilizing | 1.0 | D | 0.783 | deleterious | None | None | None | None | N |
E/V | 0.9557 | likely_pathogenic | 0.9414 | pathogenic | 0.013 | Stabilizing | 1.0 | D | 0.792 | deleterious | N | 0.487412806 | None | None | N |
E/W | 0.9991 | likely_pathogenic | 0.9988 | pathogenic | 0.336 | Stabilizing | 1.0 | D | 0.775 | deleterious | None | None | None | None | N |
E/Y | 0.9961 | likely_pathogenic | 0.995 | pathogenic | 0.314 | Stabilizing | 1.0 | D | 0.787 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.