Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17090 | 51493;51494;51495 | chr2:178610258;178610257;178610256 | chr2:179474985;179474984;179474983 |
N2AB | 15449 | 46570;46571;46572 | chr2:178610258;178610257;178610256 | chr2:179474985;179474984;179474983 |
N2A | 14522 | 43789;43790;43791 | chr2:178610258;178610257;178610256 | chr2:179474985;179474984;179474983 |
N2B | 8025 | 24298;24299;24300 | chr2:178610258;178610257;178610256 | chr2:179474985;179474984;179474983 |
Novex-1 | 8150 | 24673;24674;24675 | chr2:178610258;178610257;178610256 | chr2:179474985;179474984;179474983 |
Novex-2 | 8217 | 24874;24875;24876 | chr2:178610258;178610257;178610256 | chr2:179474985;179474984;179474983 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/E | None | None | 1.0 | N | 0.682 | 0.488 | 0.511220899679 | gnomAD-4.0.0 | 1.59281E-06 | None | None | None | None | N | None | 0 | 2.28697E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.3571 | ambiguous | 0.3587 | ambiguous | -0.259 | Destabilizing | 1.0 | D | 0.535 | neutral | N | 0.520119171 | None | None | N |
G/C | 0.7092 | likely_pathogenic | 0.6837 | pathogenic | -0.905 | Destabilizing | 1.0 | D | 0.727 | prob.delet. | None | None | None | None | N |
G/D | 0.8545 | likely_pathogenic | 0.7829 | pathogenic | -0.784 | Destabilizing | 1.0 | D | 0.594 | neutral | None | None | None | None | N |
G/E | 0.8247 | likely_pathogenic | 0.7738 | pathogenic | -0.942 | Destabilizing | 1.0 | D | 0.682 | prob.neutral | N | 0.517385511 | None | None | N |
G/F | 0.9304 | likely_pathogenic | 0.916 | pathogenic | -0.99 | Destabilizing | 1.0 | D | 0.703 | prob.neutral | None | None | None | None | N |
G/H | 0.8988 | likely_pathogenic | 0.8623 | pathogenic | -0.405 | Destabilizing | 1.0 | D | 0.693 | prob.neutral | None | None | None | None | N |
G/I | 0.8147 | likely_pathogenic | 0.7977 | pathogenic | -0.443 | Destabilizing | 1.0 | D | 0.711 | prob.delet. | None | None | None | None | N |
G/K | 0.9416 | likely_pathogenic | 0.9196 | pathogenic | -0.883 | Destabilizing | 1.0 | D | 0.684 | prob.neutral | None | None | None | None | N |
G/L | 0.8353 | likely_pathogenic | 0.812 | pathogenic | -0.443 | Destabilizing | 1.0 | D | 0.721 | prob.delet. | None | None | None | None | N |
G/M | 0.8405 | likely_pathogenic | 0.835 | pathogenic | -0.616 | Destabilizing | 1.0 | D | 0.718 | prob.delet. | None | None | None | None | N |
G/N | 0.651 | likely_pathogenic | 0.6204 | pathogenic | -0.504 | Destabilizing | 1.0 | D | 0.607 | neutral | None | None | None | None | N |
G/P | 0.97 | likely_pathogenic | 0.9686 | pathogenic | -0.352 | Destabilizing | 1.0 | D | 0.697 | prob.neutral | None | None | None | None | N |
G/Q | 0.7975 | likely_pathogenic | 0.7633 | pathogenic | -0.794 | Destabilizing | 1.0 | D | 0.707 | prob.neutral | None | None | None | None | N |
G/R | 0.9004 | likely_pathogenic | 0.859 | pathogenic | -0.398 | Destabilizing | 1.0 | D | 0.695 | prob.neutral | N | 0.485842643 | None | None | N |
G/S | 0.2366 | likely_benign | 0.225 | benign | -0.611 | Destabilizing | 1.0 | D | 0.609 | neutral | None | None | None | None | N |
G/T | 0.4613 | ambiguous | 0.4565 | ambiguous | -0.709 | Destabilizing | 1.0 | D | 0.681 | prob.neutral | None | None | None | None | N |
G/V | 0.6857 | likely_pathogenic | 0.6594 | pathogenic | -0.352 | Destabilizing | 1.0 | D | 0.717 | prob.delet. | N | 0.481678814 | None | None | N |
G/W | 0.9092 | likely_pathogenic | 0.8714 | pathogenic | -1.129 | Destabilizing | 1.0 | D | 0.711 | prob.delet. | N | 0.496428934 | None | None | N |
G/Y | 0.9258 | likely_pathogenic | 0.8963 | pathogenic | -0.802 | Destabilizing | 1.0 | D | 0.701 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.