Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17092 | 51499;51500;51501 | chr2:178610252;178610251;178610250 | chr2:179474979;179474978;179474977 |
N2AB | 15451 | 46576;46577;46578 | chr2:178610252;178610251;178610250 | chr2:179474979;179474978;179474977 |
N2A | 14524 | 43795;43796;43797 | chr2:178610252;178610251;178610250 | chr2:179474979;179474978;179474977 |
N2B | 8027 | 24304;24305;24306 | chr2:178610252;178610251;178610250 | chr2:179474979;179474978;179474977 |
Novex-1 | 8152 | 24679;24680;24681 | chr2:178610252;178610251;178610250 | chr2:179474979;179474978;179474977 |
Novex-2 | 8219 | 24880;24881;24882 | chr2:178610252;178610251;178610250 | chr2:179474979;179474978;179474977 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/K | rs1207362275 | 0.134 | 0.046 | N | 0.467 | 0.107 | 0.238096912614 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.91E-06 | 0 |
R/K | rs1207362275 | 0.134 | 0.046 | N | 0.467 | 0.107 | 0.238096912614 | gnomAD-4.0.0 | 6.84498E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99815E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.9507 | likely_pathogenic | 0.8982 | pathogenic | -0.013 | Destabilizing | 0.953 | D | 0.609 | neutral | None | None | None | None | N |
R/C | 0.8245 | likely_pathogenic | 0.7156 | pathogenic | -0.32 | Destabilizing | 0.999 | D | 0.69 | prob.neutral | None | None | None | None | N |
R/D | 0.9828 | likely_pathogenic | 0.9627 | pathogenic | -0.366 | Destabilizing | 0.986 | D | 0.623 | neutral | None | None | None | None | N |
R/E | 0.9362 | likely_pathogenic | 0.873 | pathogenic | -0.337 | Destabilizing | 0.91 | D | 0.618 | neutral | None | None | None | None | N |
R/F | 0.9685 | likely_pathogenic | 0.9384 | pathogenic | -0.36 | Destabilizing | 0.998 | D | 0.669 | neutral | None | None | None | None | N |
R/G | 0.9034 | likely_pathogenic | 0.8105 | pathogenic | -0.125 | Destabilizing | 0.939 | D | 0.525 | neutral | N | 0.444055614 | None | None | N |
R/H | 0.5934 | likely_pathogenic | 0.4306 | ambiguous | -0.581 | Destabilizing | 0.998 | D | 0.645 | neutral | None | None | None | None | N |
R/I | 0.911 | likely_pathogenic | 0.8255 | pathogenic | 0.236 | Stabilizing | 0.991 | D | 0.676 | prob.neutral | N | 0.514766493 | None | None | N |
R/K | 0.3264 | likely_benign | 0.2375 | benign | -0.249 | Destabilizing | 0.046 | N | 0.467 | neutral | N | 0.425280639 | None | None | N |
R/L | 0.8014 | likely_pathogenic | 0.6839 | pathogenic | 0.236 | Stabilizing | 0.953 | D | 0.525 | neutral | None | None | None | None | N |
R/M | 0.868 | likely_pathogenic | 0.7689 | pathogenic | -0.159 | Destabilizing | 0.999 | D | 0.614 | neutral | None | None | None | None | N |
R/N | 0.9634 | likely_pathogenic | 0.9294 | pathogenic | -0.172 | Destabilizing | 0.986 | D | 0.587 | neutral | None | None | None | None | N |
R/P | 0.97 | likely_pathogenic | 0.9225 | pathogenic | 0.169 | Stabilizing | 0.993 | D | 0.625 | neutral | None | None | None | None | N |
R/Q | 0.5282 | ambiguous | 0.3729 | ambiguous | -0.2 | Destabilizing | 0.986 | D | 0.587 | neutral | None | None | None | None | N |
R/S | 0.9722 | likely_pathogenic | 0.941 | pathogenic | -0.319 | Destabilizing | 0.939 | D | 0.581 | neutral | N | 0.463721597 | None | None | N |
R/T | 0.9342 | likely_pathogenic | 0.8574 | pathogenic | -0.199 | Destabilizing | 0.982 | D | 0.571 | neutral | N | 0.482846076 | None | None | N |
R/V | 0.9249 | likely_pathogenic | 0.8608 | pathogenic | 0.169 | Stabilizing | 0.993 | D | 0.681 | prob.neutral | None | None | None | None | N |
R/W | 0.8293 | likely_pathogenic | 0.6933 | pathogenic | -0.569 | Destabilizing | 0.999 | D | 0.715 | prob.delet. | None | None | None | None | N |
R/Y | 0.922 | likely_pathogenic | 0.8624 | pathogenic | -0.18 | Destabilizing | 0.998 | D | 0.634 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.