Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17096 | 51511;51512;51513 | chr2:178610240;178610239;178610238 | chr2:179474967;179474966;179474965 |
N2AB | 15455 | 46588;46589;46590 | chr2:178610240;178610239;178610238 | chr2:179474967;179474966;179474965 |
N2A | 14528 | 43807;43808;43809 | chr2:178610240;178610239;178610238 | chr2:179474967;179474966;179474965 |
N2B | 8031 | 24316;24317;24318 | chr2:178610240;178610239;178610238 | chr2:179474967;179474966;179474965 |
Novex-1 | 8156 | 24691;24692;24693 | chr2:178610240;178610239;178610238 | chr2:179474967;179474966;179474965 |
Novex-2 | 8223 | 24892;24893;24894 | chr2:178610240;178610239;178610238 | chr2:179474967;179474966;179474965 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/L | rs772628026 | -0.24 | 0.98 | N | 0.507 | 0.38 | 0.598305510223 | gnomAD-2.1.1 | 8.05E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.78E-05 | 0 |
P/L | rs772628026 | -0.24 | 0.98 | N | 0.507 | 0.38 | 0.598305510223 | gnomAD-4.0.0 | 6.16046E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.0983E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.1824 | likely_benign | 0.2134 | benign | -1.003 | Destabilizing | 0.961 | D | 0.399 | neutral | N | 0.468090054 | None | None | N |
P/C | 0.8592 | likely_pathogenic | 0.8786 | pathogenic | -0.728 | Destabilizing | 1.0 | D | 0.63 | neutral | None | None | None | None | N |
P/D | 0.8693 | likely_pathogenic | 0.8742 | pathogenic | -0.886 | Destabilizing | 0.942 | D | 0.399 | neutral | None | None | None | None | N |
P/E | 0.748 | likely_pathogenic | 0.7537 | pathogenic | -0.956 | Destabilizing | 0.97 | D | 0.409 | neutral | None | None | None | None | N |
P/F | 0.945 | likely_pathogenic | 0.9548 | pathogenic | -0.92 | Destabilizing | 0.999 | D | 0.599 | neutral | None | None | None | None | N |
P/G | 0.638 | likely_pathogenic | 0.6783 | pathogenic | -1.222 | Destabilizing | 0.97 | D | 0.427 | neutral | None | None | None | None | N |
P/H | 0.6042 | likely_pathogenic | 0.6336 | pathogenic | -0.695 | Destabilizing | 0.996 | D | 0.584 | neutral | None | None | None | None | N |
P/I | 0.8322 | likely_pathogenic | 0.8574 | pathogenic | -0.54 | Destabilizing | 0.999 | D | 0.6 | neutral | None | None | None | None | N |
P/K | 0.8017 | likely_pathogenic | 0.8147 | pathogenic | -0.946 | Destabilizing | 0.304 | N | 0.307 | neutral | None | None | None | None | N |
P/L | 0.4728 | ambiguous | 0.5299 | ambiguous | -0.54 | Destabilizing | 0.98 | D | 0.507 | neutral | N | 0.485926453 | None | None | N |
P/M | 0.7643 | likely_pathogenic | 0.8035 | pathogenic | -0.443 | Destabilizing | 1.0 | D | 0.578 | neutral | None | None | None | None | N |
P/N | 0.6574 | likely_pathogenic | 0.6979 | pathogenic | -0.671 | Destabilizing | 0.155 | N | 0.295 | neutral | None | None | None | None | N |
P/Q | 0.4917 | ambiguous | 0.5094 | ambiguous | -0.916 | Destabilizing | 0.989 | D | 0.491 | neutral | N | 0.484982304 | None | None | N |
P/R | 0.6681 | likely_pathogenic | 0.659 | pathogenic | -0.322 | Destabilizing | 0.925 | D | 0.493 | neutral | N | 0.476901538 | None | None | N |
P/S | 0.3118 | likely_benign | 0.3582 | ambiguous | -1.072 | Destabilizing | 0.961 | D | 0.397 | neutral | N | 0.49371643 | None | None | N |
P/T | 0.319 | likely_benign | 0.3641 | ambiguous | -1.044 | Destabilizing | 0.961 | D | 0.407 | neutral | N | 0.457448986 | None | None | N |
P/V | 0.6347 | likely_pathogenic | 0.6771 | pathogenic | -0.659 | Destabilizing | 0.996 | D | 0.485 | neutral | None | None | None | None | N |
P/W | 0.9679 | likely_pathogenic | 0.9701 | pathogenic | -1.03 | Destabilizing | 1.0 | D | 0.665 | neutral | None | None | None | None | N |
P/Y | 0.9226 | likely_pathogenic | 0.9327 | pathogenic | -0.764 | Destabilizing | 0.999 | D | 0.603 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.