Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17098 | 51517;51518;51519 | chr2:178610234;178610233;178610232 | chr2:179474961;179474960;179474959 |
N2AB | 15457 | 46594;46595;46596 | chr2:178610234;178610233;178610232 | chr2:179474961;179474960;179474959 |
N2A | 14530 | 43813;43814;43815 | chr2:178610234;178610233;178610232 | chr2:179474961;179474960;179474959 |
N2B | 8033 | 24322;24323;24324 | chr2:178610234;178610233;178610232 | chr2:179474961;179474960;179474959 |
Novex-1 | 8158 | 24697;24698;24699 | chr2:178610234;178610233;178610232 | chr2:179474961;179474960;179474959 |
Novex-2 | 8225 | 24898;24899;24900 | chr2:178610234;178610233;178610232 | chr2:179474961;179474960;179474959 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
M/L | None | None | 0.927 | N | 0.278 | 0.36 | 0.52633505579 | gnomAD-4.0.0 | 1.59281E-06 | None | None | None | None | N | None | 5.67344E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
M/T | None | None | 0.994 | N | 0.551 | 0.497 | 0.735427462381 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
M/A | 0.7639 | likely_pathogenic | 0.7394 | pathogenic | -2.094 | Highly Destabilizing | 0.989 | D | 0.54 | neutral | None | None | None | None | N |
M/C | 0.8208 | likely_pathogenic | 0.8145 | pathogenic | -1.995 | Destabilizing | 1.0 | D | 0.636 | neutral | None | None | None | None | N |
M/D | 0.9842 | likely_pathogenic | 0.9811 | pathogenic | -1.59 | Destabilizing | 0.999 | D | 0.7 | prob.neutral | None | None | None | None | N |
M/E | 0.9116 | likely_pathogenic | 0.9043 | pathogenic | -1.368 | Destabilizing | 0.999 | D | 0.622 | neutral | None | None | None | None | N |
M/F | 0.5795 | likely_pathogenic | 0.548 | ambiguous | -0.689 | Destabilizing | 0.999 | D | 0.531 | neutral | None | None | None | None | N |
M/G | 0.9344 | likely_pathogenic | 0.9172 | pathogenic | -2.579 | Highly Destabilizing | 0.995 | D | 0.646 | neutral | None | None | None | None | N |
M/H | 0.8638 | likely_pathogenic | 0.8392 | pathogenic | -2.034 | Highly Destabilizing | 1.0 | D | 0.683 | prob.neutral | None | None | None | None | N |
M/I | 0.7625 | likely_pathogenic | 0.7698 | pathogenic | -0.717 | Destabilizing | 0.985 | D | 0.533 | neutral | N | 0.44629063 | None | None | N |
M/K | 0.6799 | likely_pathogenic | 0.6391 | pathogenic | -1.206 | Destabilizing | 0.994 | D | 0.552 | neutral | N | 0.452139166 | None | None | N |
M/L | 0.2607 | likely_benign | 0.2569 | benign | -0.717 | Destabilizing | 0.927 | D | 0.278 | neutral | N | 0.415565078 | None | None | N |
M/N | 0.8625 | likely_pathogenic | 0.8566 | pathogenic | -1.593 | Destabilizing | 0.999 | D | 0.665 | neutral | None | None | None | None | N |
M/P | 0.9929 | likely_pathogenic | 0.9907 | pathogenic | -1.156 | Destabilizing | 0.999 | D | 0.669 | neutral | None | None | None | None | N |
M/Q | 0.616 | likely_pathogenic | 0.5928 | pathogenic | -1.302 | Destabilizing | 0.999 | D | 0.529 | neutral | None | None | None | None | N |
M/R | 0.7395 | likely_pathogenic | 0.6986 | pathogenic | -1.209 | Destabilizing | 0.998 | D | 0.589 | neutral | N | 0.456718267 | None | None | N |
M/S | 0.8044 | likely_pathogenic | 0.7865 | pathogenic | -2.204 | Highly Destabilizing | 0.995 | D | 0.52 | neutral | None | None | None | None | N |
M/T | 0.7286 | likely_pathogenic | 0.7232 | pathogenic | -1.844 | Destabilizing | 0.994 | D | 0.551 | neutral | N | 0.406153374 | None | None | N |
M/V | 0.2914 | likely_benign | 0.2981 | benign | -1.156 | Destabilizing | 0.985 | D | 0.457 | neutral | N | 0.419162743 | None | None | N |
M/W | 0.934 | likely_pathogenic | 0.9247 | pathogenic | -0.954 | Destabilizing | 1.0 | D | 0.644 | neutral | None | None | None | None | N |
M/Y | 0.8652 | likely_pathogenic | 0.8435 | pathogenic | -0.913 | Destabilizing | 0.999 | D | 0.643 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.