Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17101 | 51526;51527;51528 | chr2:178610225;178610224;178610223 | chr2:179474952;179474951;179474950 |
N2AB | 15460 | 46603;46604;46605 | chr2:178610225;178610224;178610223 | chr2:179474952;179474951;179474950 |
N2A | 14533 | 43822;43823;43824 | chr2:178610225;178610224;178610223 | chr2:179474952;179474951;179474950 |
N2B | 8036 | 24331;24332;24333 | chr2:178610225;178610224;178610223 | chr2:179474952;179474951;179474950 |
Novex-1 | 8161 | 24706;24707;24708 | chr2:178610225;178610224;178610223 | chr2:179474952;179474951;179474950 |
Novex-2 | 8228 | 24907;24908;24909 | chr2:178610225;178610224;178610223 | chr2:179474952;179474951;179474950 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | rs1406870908 | None | 0.999 | N | 0.611 | 0.154 | 0.228597637076 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 6.56E-05 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/D | rs1406870908 | None | 0.999 | N | 0.611 | 0.154 | 0.228597637076 | gnomAD-4.0.0 | 6.58198E-06 | None | None | None | None | N | None | 0 | 6.56426E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/K | None | None | 0.999 | N | 0.637 | 0.376 | 0.341934017632 | gnomAD-4.0.0 | 1.59277E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43328E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.3342 | likely_benign | 0.373 | ambiguous | -0.75 | Destabilizing | 0.999 | D | 0.675 | prob.neutral | N | 0.44788814 | None | None | N |
E/C | 0.9285 | likely_pathogenic | 0.9403 | pathogenic | -0.445 | Destabilizing | 1.0 | D | 0.762 | deleterious | None | None | None | None | N |
E/D | 0.1727 | likely_benign | 0.1815 | benign | -1.059 | Destabilizing | 0.999 | D | 0.611 | neutral | N | 0.489140117 | None | None | N |
E/F | 0.9067 | likely_pathogenic | 0.9298 | pathogenic | -0.009 | Destabilizing | 1.0 | D | 0.814 | deleterious | None | None | None | None | N |
E/G | 0.3671 | ambiguous | 0.3974 | ambiguous | -1.129 | Destabilizing | 1.0 | D | 0.742 | deleterious | N | 0.414524928 | None | None | N |
E/H | 0.7598 | likely_pathogenic | 0.7988 | pathogenic | -0.143 | Destabilizing | 1.0 | D | 0.755 | deleterious | None | None | None | None | N |
E/I | 0.5612 | ambiguous | 0.6092 | pathogenic | 0.291 | Stabilizing | 1.0 | D | 0.796 | deleterious | None | None | None | None | N |
E/K | 0.3524 | ambiguous | 0.3874 | ambiguous | -0.464 | Destabilizing | 0.999 | D | 0.637 | neutral | N | 0.493679145 | None | None | N |
E/L | 0.7075 | likely_pathogenic | 0.7599 | pathogenic | 0.291 | Stabilizing | 1.0 | D | 0.78 | deleterious | None | None | None | None | N |
E/M | 0.6876 | likely_pathogenic | 0.7383 | pathogenic | 0.634 | Stabilizing | 1.0 | D | 0.799 | deleterious | None | None | None | None | N |
E/N | 0.4025 | ambiguous | 0.4477 | ambiguous | -1.076 | Destabilizing | 1.0 | D | 0.735 | prob.delet. | None | None | None | None | N |
E/P | 0.8742 | likely_pathogenic | 0.8759 | pathogenic | -0.034 | Destabilizing | 1.0 | D | 0.791 | deleterious | None | None | None | None | N |
E/Q | 0.2554 | likely_benign | 0.2899 | benign | -0.901 | Destabilizing | 1.0 | D | 0.698 | prob.neutral | N | 0.513651772 | None | None | N |
E/R | 0.5963 | likely_pathogenic | 0.6466 | pathogenic | -0.102 | Destabilizing | 1.0 | D | 0.741 | deleterious | None | None | None | None | N |
E/S | 0.379 | ambiguous | 0.422 | ambiguous | -1.359 | Destabilizing | 0.999 | D | 0.653 | neutral | None | None | None | None | N |
E/T | 0.4183 | ambiguous | 0.4603 | ambiguous | -1.032 | Destabilizing | 1.0 | D | 0.723 | prob.delet. | None | None | None | None | N |
E/V | 0.3734 | ambiguous | 0.4175 | ambiguous | -0.034 | Destabilizing | 1.0 | D | 0.769 | deleterious | N | 0.381108574 | None | None | N |
E/W | 0.9745 | likely_pathogenic | 0.9821 | pathogenic | 0.296 | Stabilizing | 1.0 | D | 0.759 | deleterious | None | None | None | None | N |
E/Y | 0.848 | likely_pathogenic | 0.882 | pathogenic | 0.266 | Stabilizing | 1.0 | D | 0.809 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.