Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17106 | 51541;51542;51543 | chr2:178610210;178610209;178610208 | chr2:179474937;179474936;179474935 |
N2AB | 15465 | 46618;46619;46620 | chr2:178610210;178610209;178610208 | chr2:179474937;179474936;179474935 |
N2A | 14538 | 43837;43838;43839 | chr2:178610210;178610209;178610208 | chr2:179474937;179474936;179474935 |
N2B | 8041 | 24346;24347;24348 | chr2:178610210;178610209;178610208 | chr2:179474937;179474936;179474935 |
Novex-1 | 8166 | 24721;24722;24723 | chr2:178610210;178610209;178610208 | chr2:179474937;179474936;179474935 |
Novex-2 | 8233 | 24922;24923;24924 | chr2:178610210;178610209;178610208 | chr2:179474937;179474936;179474935 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
W/R | rs1360832418 | -1.808 | 1.0 | N | 0.886 | 0.554 | 0.51748813702 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 4.64E-05 | 0 | 0 |
W/R | rs1360832418 | -1.808 | 1.0 | N | 0.886 | 0.554 | 0.51748813702 | gnomAD-4.0.0 | 3.42242E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 5.61798E-05 | 0 | 0 | 2.31927E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
W/A | 0.7272 | likely_pathogenic | 0.7861 | pathogenic | -2.879 | Highly Destabilizing | 1.0 | D | 0.809 | deleterious | None | None | None | None | N |
W/C | 0.7254 | likely_pathogenic | 0.7774 | pathogenic | -1.911 | Destabilizing | 1.0 | D | 0.847 | deleterious | N | 0.421413615 | None | None | N |
W/D | 0.9754 | likely_pathogenic | 0.9821 | pathogenic | -2.398 | Highly Destabilizing | 1.0 | D | 0.885 | deleterious | None | None | None | None | N |
W/E | 0.9615 | likely_pathogenic | 0.9718 | pathogenic | -2.295 | Highly Destabilizing | 1.0 | D | 0.859 | deleterious | None | None | None | None | N |
W/F | 0.1786 | likely_benign | 0.1999 | benign | -1.803 | Destabilizing | 1.0 | D | 0.71 | prob.delet. | None | None | None | None | N |
W/G | 0.7007 | likely_pathogenic | 0.7548 | pathogenic | -3.107 | Highly Destabilizing | 1.0 | D | 0.723 | prob.delet. | N | 0.505434934 | None | None | N |
W/H | 0.7741 | likely_pathogenic | 0.7438 | pathogenic | -1.769 | Destabilizing | 1.0 | D | 0.845 | deleterious | None | None | None | None | N |
W/I | 0.7512 | likely_pathogenic | 0.8229 | pathogenic | -2.035 | Highly Destabilizing | 1.0 | D | 0.871 | deleterious | None | None | None | None | N |
W/K | 0.9635 | likely_pathogenic | 0.9701 | pathogenic | -2.383 | Highly Destabilizing | 1.0 | D | 0.861 | deleterious | None | None | None | None | N |
W/L | 0.6423 | likely_pathogenic | 0.7221 | pathogenic | -2.035 | Highly Destabilizing | 1.0 | D | 0.723 | prob.delet. | N | 0.437823075 | None | None | N |
W/M | 0.7375 | likely_pathogenic | 0.8064 | pathogenic | -1.65 | Destabilizing | 1.0 | D | 0.804 | deleterious | None | None | None | None | N |
W/N | 0.9329 | likely_pathogenic | 0.9457 | pathogenic | -2.979 | Highly Destabilizing | 1.0 | D | 0.877 | deleterious | None | None | None | None | N |
W/P | 0.9974 | likely_pathogenic | 0.997 | pathogenic | -2.339 | Highly Destabilizing | 1.0 | D | 0.881 | deleterious | None | None | None | None | N |
W/Q | 0.9282 | likely_pathogenic | 0.9378 | pathogenic | -2.809 | Highly Destabilizing | 1.0 | D | 0.867 | deleterious | None | None | None | None | N |
W/R | 0.9346 | likely_pathogenic | 0.9407 | pathogenic | -2.087 | Highly Destabilizing | 1.0 | D | 0.886 | deleterious | N | 0.464505476 | None | None | N |
W/S | 0.6741 | likely_pathogenic | 0.7361 | pathogenic | -3.269 | Highly Destabilizing | 1.0 | D | 0.847 | deleterious | N | 0.486849173 | None | None | N |
W/T | 0.7903 | likely_pathogenic | 0.8453 | pathogenic | -3.107 | Highly Destabilizing | 1.0 | D | 0.803 | deleterious | None | None | None | None | N |
W/V | 0.6393 | likely_pathogenic | 0.7207 | pathogenic | -2.339 | Highly Destabilizing | 1.0 | D | 0.837 | deleterious | None | None | None | None | N |
W/Y | 0.4011 | ambiguous | 0.4163 | ambiguous | -1.715 | Destabilizing | 1.0 | D | 0.673 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.