Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17108 | 51547;51548;51549 | chr2:178610204;178610203;178610202 | chr2:179474931;179474930;179474929 |
N2AB | 15467 | 46624;46625;46626 | chr2:178610204;178610203;178610202 | chr2:179474931;179474930;179474929 |
N2A | 14540 | 43843;43844;43845 | chr2:178610204;178610203;178610202 | chr2:179474931;179474930;179474929 |
N2B | 8043 | 24352;24353;24354 | chr2:178610204;178610203;178610202 | chr2:179474931;179474930;179474929 |
Novex-1 | 8168 | 24727;24728;24729 | chr2:178610204;178610203;178610202 | chr2:179474931;179474930;179474929 |
Novex-2 | 8235 | 24928;24929;24930 | chr2:178610204;178610203;178610202 | chr2:179474931;179474930;179474929 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/M | None | None | 1.0 | N | 0.751 | 0.44 | 0.66694160307 | gnomAD-4.0.0 | 3.60098E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.93752E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.8206 | likely_pathogenic | 0.7848 | pathogenic | -1.937 | Destabilizing | 0.999 | D | 0.651 | neutral | D | 0.527472005 | None | None | N |
V/C | 0.9491 | likely_pathogenic | 0.9426 | pathogenic | -1.461 | Destabilizing | 1.0 | D | 0.819 | deleterious | None | None | None | None | N |
V/D | 0.9974 | likely_pathogenic | 0.9974 | pathogenic | -2.239 | Highly Destabilizing | 1.0 | D | 0.83 | deleterious | None | None | None | None | N |
V/E | 0.9864 | likely_pathogenic | 0.987 | pathogenic | -2.022 | Highly Destabilizing | 1.0 | D | 0.822 | deleterious | D | 0.543112058 | None | None | N |
V/F | 0.845 | likely_pathogenic | 0.8711 | pathogenic | -1.15 | Destabilizing | 1.0 | D | 0.787 | deleterious | None | None | None | None | N |
V/G | 0.9616 | likely_pathogenic | 0.9484 | pathogenic | -2.484 | Highly Destabilizing | 1.0 | D | 0.834 | deleterious | N | 0.520399447 | None | None | N |
V/H | 0.9961 | likely_pathogenic | 0.996 | pathogenic | -2.205 | Highly Destabilizing | 1.0 | D | 0.869 | deleterious | None | None | None | None | N |
V/I | 0.0994 | likely_benign | 0.1119 | benign | -0.419 | Destabilizing | 0.998 | D | 0.549 | neutral | None | None | None | None | N |
V/K | 0.9935 | likely_pathogenic | 0.9927 | pathogenic | -1.63 | Destabilizing | 1.0 | D | 0.823 | deleterious | None | None | None | None | N |
V/L | 0.609 | likely_pathogenic | 0.6764 | pathogenic | -0.419 | Destabilizing | 0.997 | D | 0.662 | neutral | N | 0.517844084 | None | None | N |
V/M | 0.6277 | likely_pathogenic | 0.691 | pathogenic | -0.434 | Destabilizing | 1.0 | D | 0.751 | deleterious | N | 0.513144518 | None | None | N |
V/N | 0.989 | likely_pathogenic | 0.9894 | pathogenic | -1.891 | Destabilizing | 1.0 | D | 0.879 | deleterious | None | None | None | None | N |
V/P | 0.9887 | likely_pathogenic | 0.982 | pathogenic | -0.896 | Destabilizing | 1.0 | D | 0.825 | deleterious | None | None | None | None | N |
V/Q | 0.985 | likely_pathogenic | 0.9837 | pathogenic | -1.726 | Destabilizing | 1.0 | D | 0.875 | deleterious | None | None | None | None | N |
V/R | 0.9899 | likely_pathogenic | 0.9885 | pathogenic | -1.498 | Destabilizing | 1.0 | D | 0.879 | deleterious | None | None | None | None | N |
V/S | 0.961 | likely_pathogenic | 0.9545 | pathogenic | -2.556 | Highly Destabilizing | 1.0 | D | 0.82 | deleterious | None | None | None | None | N |
V/T | 0.8816 | likely_pathogenic | 0.8746 | pathogenic | -2.181 | Highly Destabilizing | 0.999 | D | 0.619 | neutral | None | None | None | None | N |
V/W | 0.9976 | likely_pathogenic | 0.998 | pathogenic | -1.626 | Destabilizing | 1.0 | D | 0.855 | deleterious | None | None | None | None | N |
V/Y | 0.989 | likely_pathogenic | 0.9903 | pathogenic | -1.222 | Destabilizing | 1.0 | D | 0.789 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.