Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17115 | 51568;51569;51570 | chr2:178610183;178610182;178610181 | chr2:179474910;179474909;179474908 |
N2AB | 15474 | 46645;46646;46647 | chr2:178610183;178610182;178610181 | chr2:179474910;179474909;179474908 |
N2A | 14547 | 43864;43865;43866 | chr2:178610183;178610182;178610181 | chr2:179474910;179474909;179474908 |
N2B | 8050 | 24373;24374;24375 | chr2:178610183;178610182;178610181 | chr2:179474910;179474909;179474908 |
Novex-1 | 8175 | 24748;24749;24750 | chr2:178610183;178610182;178610181 | chr2:179474910;179474909;179474908 |
Novex-2 | 8242 | 24949;24950;24951 | chr2:178610183;178610182;178610181 | chr2:179474910;179474909;179474908 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/D | rs796362520 | None | 0.709 | N | 0.715 | 0.216 | 0.233150807113 | gnomAD-4.0.0 | 6.00161E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 6.56251E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.1649 | likely_benign | 0.195 | benign | -0.656 | Destabilizing | 0.41 | N | 0.433 | neutral | N | 0.444442403 | None | None | N |
G/C | 0.3107 | likely_benign | 0.3693 | ambiguous | -0.708 | Destabilizing | 0.023 | N | 0.559 | neutral | N | 0.447869497 | None | None | N |
G/D | 0.8591 | likely_pathogenic | 0.8759 | pathogenic | -1.68 | Destabilizing | 0.709 | D | 0.715 | prob.delet. | N | 0.506781728 | None | None | N |
G/E | 0.747 | likely_pathogenic | 0.7978 | pathogenic | -1.619 | Destabilizing | 0.764 | D | 0.719 | prob.delet. | None | None | None | None | N |
G/F | 0.9031 | likely_pathogenic | 0.9302 | pathogenic | -0.753 | Destabilizing | 0.98 | D | 0.715 | prob.delet. | None | None | None | None | N |
G/H | 0.8063 | likely_pathogenic | 0.824 | pathogenic | -1.731 | Destabilizing | 0.98 | D | 0.661 | neutral | None | None | None | None | N |
G/I | 0.5855 | likely_pathogenic | 0.714 | pathogenic | 0.113 | Stabilizing | 0.866 | D | 0.729 | prob.delet. | None | None | None | None | N |
G/K | 0.8887 | likely_pathogenic | 0.8969 | pathogenic | -1.253 | Destabilizing | 0.764 | D | 0.719 | prob.delet. | None | None | None | None | N |
G/L | 0.7408 | likely_pathogenic | 0.8082 | pathogenic | 0.113 | Stabilizing | 0.764 | D | 0.735 | prob.delet. | None | None | None | None | N |
G/M | 0.6328 | likely_pathogenic | 0.7273 | pathogenic | 0.107 | Stabilizing | 0.993 | D | 0.689 | prob.neutral | None | None | None | None | N |
G/N | 0.5511 | ambiguous | 0.6225 | pathogenic | -1.121 | Destabilizing | 0.764 | D | 0.723 | prob.delet. | None | None | None | None | N |
G/P | 0.9967 | likely_pathogenic | 0.998 | pathogenic | -0.099 | Destabilizing | 0.866 | D | 0.713 | prob.delet. | None | None | None | None | N |
G/Q | 0.6612 | likely_pathogenic | 0.701 | pathogenic | -1.115 | Destabilizing | 0.866 | D | 0.698 | prob.neutral | None | None | None | None | N |
G/R | 0.7906 | likely_pathogenic | 0.7978 | pathogenic | -1.18 | Destabilizing | 0.83 | D | 0.709 | prob.delet. | N | 0.418333237 | None | None | N |
G/S | 0.1373 | likely_benign | 0.1728 | benign | -1.386 | Destabilizing | 0.004 | N | 0.32 | neutral | N | 0.414100853 | None | None | N |
G/T | 0.2364 | likely_benign | 0.3427 | ambiguous | -1.235 | Destabilizing | 0.764 | D | 0.707 | prob.neutral | None | None | None | None | N |
G/V | 0.4082 | ambiguous | 0.5508 | ambiguous | -0.099 | Destabilizing | 0.709 | D | 0.733 | prob.delet. | N | 0.42753151 | None | None | N |
G/W | 0.8546 | likely_pathogenic | 0.8802 | pathogenic | -1.445 | Destabilizing | 0.993 | D | 0.605 | neutral | None | None | None | None | N |
G/Y | 0.8393 | likely_pathogenic | 0.8648 | pathogenic | -0.888 | Destabilizing | 0.98 | D | 0.717 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.