Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17133 | 51622;51623;51624 | chr2:178610129;178610128;178610127 | chr2:179474856;179474855;179474854 |
N2AB | 15492 | 46699;46700;46701 | chr2:178610129;178610128;178610127 | chr2:179474856;179474855;179474854 |
N2A | 14565 | 43918;43919;43920 | chr2:178610129;178610128;178610127 | chr2:179474856;179474855;179474854 |
N2B | 8068 | 24427;24428;24429 | chr2:178610129;178610128;178610127 | chr2:179474856;179474855;179474854 |
Novex-1 | 8193 | 24802;24803;24804 | chr2:178610129;178610128;178610127 | chr2:179474856;179474855;179474854 |
Novex-2 | 8260 | 25003;25004;25005 | chr2:178610129;178610128;178610127 | chr2:179474856;179474855;179474854 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/T | rs373628708 | None | 0.651 | N | 0.687 | 0.183 | None | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
I/T | rs373628708 | None | 0.651 | N | 0.687 | 0.183 | None | gnomAD-4.0.0 | 2.48012E-06 | None | None | None | None | N | None | 1.33579E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 2.54383E-06 | 0 | 0 |
I/V | None | None | 0.01 | N | 0.153 | 0.065 | 0.362160248664 | gnomAD-4.0.0 | 1.59313E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.78443E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.1099 | likely_benign | 0.1493 | benign | -1.811 | Destabilizing | 0.505 | D | 0.602 | neutral | None | None | None | None | N |
I/C | 0.4756 | ambiguous | 0.5131 | ambiguous | -1.047 | Destabilizing | 0.995 | D | 0.568 | neutral | None | None | None | None | N |
I/D | 0.5889 | likely_pathogenic | 0.6897 | pathogenic | -1.193 | Destabilizing | 0.982 | D | 0.791 | deleterious | None | None | None | None | N |
I/E | 0.3936 | ambiguous | 0.4758 | ambiguous | -1.152 | Destabilizing | 0.982 | D | 0.769 | deleterious | None | None | None | None | N |
I/F | 0.1861 | likely_benign | 0.2555 | benign | -1.131 | Destabilizing | 0.868 | D | 0.71 | prob.delet. | N | 0.469530062 | None | None | N |
I/G | 0.4149 | ambiguous | 0.5235 | ambiguous | -2.178 | Highly Destabilizing | 0.982 | D | 0.763 | deleterious | None | None | None | None | N |
I/H | 0.3887 | ambiguous | 0.4966 | ambiguous | -1.372 | Destabilizing | 0.995 | D | 0.753 | deleterious | None | None | None | None | N |
I/K | 0.2543 | likely_benign | 0.3272 | benign | -1.302 | Destabilizing | 0.946 | D | 0.764 | deleterious | None | None | None | None | N |
I/L | 0.0885 | likely_benign | 0.1028 | benign | -0.852 | Destabilizing | 0.001 | N | 0.196 | neutral | N | 0.335330638 | None | None | N |
I/M | 0.0771 | likely_benign | 0.0927 | benign | -0.676 | Destabilizing | 0.868 | D | 0.66 | prob.neutral | N | 0.499332894 | None | None | N |
I/N | 0.2003 | likely_benign | 0.2643 | benign | -1.133 | Destabilizing | 0.976 | D | 0.783 | deleterious | N | 0.461892013 | None | None | N |
I/P | 0.8158 | likely_pathogenic | 0.8744 | pathogenic | -1.142 | Destabilizing | 0.982 | D | 0.781 | deleterious | None | None | None | None | N |
I/Q | 0.2674 | likely_benign | 0.3234 | benign | -1.258 | Destabilizing | 0.982 | D | 0.764 | deleterious | None | None | None | None | N |
I/R | 0.1949 | likely_benign | 0.2528 | benign | -0.75 | Destabilizing | 0.946 | D | 0.784 | deleterious | None | None | None | None | N |
I/S | 0.1471 | likely_benign | 0.1883 | benign | -1.788 | Destabilizing | 0.93 | D | 0.675 | prob.neutral | N | 0.333740623 | None | None | N |
I/T | 0.062 | likely_benign | 0.0761 | benign | -1.629 | Destabilizing | 0.651 | D | 0.687 | prob.delet. | N | 0.401054198 | None | None | N |
I/V | 0.0621 | likely_benign | 0.0648 | benign | -1.142 | Destabilizing | 0.01 | N | 0.153 | neutral | N | 0.384431307 | None | None | N |
I/W | 0.7453 | likely_pathogenic | 0.8207 | pathogenic | -1.24 | Destabilizing | 0.995 | D | 0.773 | deleterious | None | None | None | None | N |
I/Y | 0.5307 | ambiguous | 0.617 | pathogenic | -1.024 | Destabilizing | 0.946 | D | 0.708 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.