Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17138 | 51637;51638;51639 | chr2:178610114;178610113;178610112 | chr2:179474841;179474840;179474839 |
N2AB | 15497 | 46714;46715;46716 | chr2:178610114;178610113;178610112 | chr2:179474841;179474840;179474839 |
N2A | 14570 | 43933;43934;43935 | chr2:178610114;178610113;178610112 | chr2:179474841;179474840;179474839 |
N2B | 8073 | 24442;24443;24444 | chr2:178610114;178610113;178610112 | chr2:179474841;179474840;179474839 |
Novex-1 | 8198 | 24817;24818;24819 | chr2:178610114;178610113;178610112 | chr2:179474841;179474840;179474839 |
Novex-2 | 8265 | 25018;25019;25020 | chr2:178610114;178610113;178610112 | chr2:179474841;179474840;179474839 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/R | None | None | 1.0 | N | 0.921 | 0.379 | 0.486993258117 | gnomAD-4.0.0 | 1.5933E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.02975E-05 |
P/S | None | None | 1.0 | N | 0.894 | 0.298 | 0.377799810692 | gnomAD-4.0.0 | 1.59327E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.78598E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.1948 | likely_benign | 0.2823 | benign | -1.119 | Destabilizing | 0.999 | D | 0.839 | deleterious | N | 0.486419525 | None | None | N |
P/C | 0.894 | likely_pathogenic | 0.9359 | pathogenic | -0.693 | Destabilizing | 1.0 | D | 0.831 | deleterious | None | None | None | None | N |
P/D | 0.9667 | likely_pathogenic | 0.9804 | pathogenic | -0.662 | Destabilizing | 1.0 | D | 0.895 | deleterious | None | None | None | None | N |
P/E | 0.895 | likely_pathogenic | 0.9464 | pathogenic | -0.654 | Destabilizing | 1.0 | D | 0.891 | deleterious | None | None | None | None | N |
P/F | 0.98 | likely_pathogenic | 0.989 | pathogenic | -0.773 | Destabilizing | 1.0 | D | 0.881 | deleterious | None | None | None | None | N |
P/G | 0.7745 | likely_pathogenic | 0.831 | pathogenic | -1.428 | Destabilizing | 1.0 | D | 0.892 | deleterious | None | None | None | None | N |
P/H | 0.8278 | likely_pathogenic | 0.9035 | pathogenic | -0.88 | Destabilizing | 1.0 | D | 0.846 | deleterious | None | None | None | None | N |
P/I | 0.8964 | likely_pathogenic | 0.9405 | pathogenic | -0.38 | Destabilizing | 1.0 | D | 0.896 | deleterious | None | None | None | None | N |
P/K | 0.9226 | likely_pathogenic | 0.9599 | pathogenic | -0.888 | Destabilizing | 1.0 | D | 0.891 | deleterious | None | None | None | None | N |
P/L | 0.7571 | likely_pathogenic | 0.8514 | pathogenic | -0.38 | Destabilizing | 1.0 | D | 0.905 | deleterious | N | 0.483438517 | None | None | N |
P/M | 0.8843 | likely_pathogenic | 0.9326 | pathogenic | -0.359 | Destabilizing | 1.0 | D | 0.845 | deleterious | None | None | None | None | N |
P/N | 0.911 | likely_pathogenic | 0.9504 | pathogenic | -0.689 | Destabilizing | 1.0 | D | 0.92 | deleterious | None | None | None | None | N |
P/Q | 0.7775 | likely_pathogenic | 0.8843 | pathogenic | -0.8 | Destabilizing | 1.0 | D | 0.911 | deleterious | N | 0.496315759 | None | None | N |
P/R | 0.8115 | likely_pathogenic | 0.89 | pathogenic | -0.448 | Destabilizing | 1.0 | D | 0.921 | deleterious | N | 0.462335748 | None | None | N |
P/S | 0.5336 | ambiguous | 0.6752 | pathogenic | -1.223 | Destabilizing | 1.0 | D | 0.894 | deleterious | N | 0.514184916 | None | None | N |
P/T | 0.5425 | ambiguous | 0.6911 | pathogenic | -1.095 | Destabilizing | 1.0 | D | 0.889 | deleterious | N | 0.465841241 | None | None | N |
P/V | 0.76 | likely_pathogenic | 0.8408 | pathogenic | -0.59 | Destabilizing | 1.0 | D | 0.895 | deleterious | None | None | None | None | N |
P/W | 0.9884 | likely_pathogenic | 0.9929 | pathogenic | -0.96 | Destabilizing | 1.0 | D | 0.805 | deleterious | None | None | None | None | N |
P/Y | 0.9705 | likely_pathogenic | 0.9835 | pathogenic | -0.648 | Destabilizing | 1.0 | D | 0.903 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.