Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17140 | 51643;51644;51645 | chr2:178610108;178610107;178610106 | chr2:179474835;179474834;179474833 |
N2AB | 15499 | 46720;46721;46722 | chr2:178610108;178610107;178610106 | chr2:179474835;179474834;179474833 |
N2A | 14572 | 43939;43940;43941 | chr2:178610108;178610107;178610106 | chr2:179474835;179474834;179474833 |
N2B | 8075 | 24448;24449;24450 | chr2:178610108;178610107;178610106 | chr2:179474835;179474834;179474833 |
Novex-1 | 8200 | 24823;24824;24825 | chr2:178610108;178610107;178610106 | chr2:179474835;179474834;179474833 |
Novex-2 | 8267 | 25024;25025;25026 | chr2:178610108;178610107;178610106 | chr2:179474835;179474834;179474833 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/F | None | None | 0.808 | N | 0.499 | 0.143 | 0.48300943003 | gnomAD-4.0.0 | 1.59336E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86172E-06 | 0 | 0 |
I/V | rs1457519537 | -0.639 | 0.004 | N | 0.204 | 0.047 | 0.3571064206 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
I/V | rs1457519537 | -0.639 | 0.004 | N | 0.204 | 0.047 | 0.3571064206 | gnomAD-4.0.0 | 1.59336E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43328E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.5163 | ambiguous | 0.6497 | pathogenic | -1.404 | Destabilizing | 0.444 | N | 0.553 | neutral | None | None | None | None | N |
I/C | 0.8692 | likely_pathogenic | 0.9109 | pathogenic | -0.868 | Destabilizing | 0.992 | D | 0.709 | prob.delet. | None | None | None | None | N |
I/D | 0.9516 | likely_pathogenic | 0.9704 | pathogenic | -0.775 | Destabilizing | 0.972 | D | 0.809 | deleterious | None | None | None | None | N |
I/E | 0.856 | likely_pathogenic | 0.8973 | pathogenic | -0.793 | Destabilizing | 0.919 | D | 0.822 | deleterious | None | None | None | None | N |
I/F | 0.3209 | likely_benign | 0.3959 | ambiguous | -0.956 | Destabilizing | 0.808 | D | 0.499 | neutral | N | 0.51199276 | None | None | N |
I/G | 0.9063 | likely_pathogenic | 0.9512 | pathogenic | -1.7 | Destabilizing | 0.919 | D | 0.767 | deleterious | None | None | None | None | N |
I/H | 0.8063 | likely_pathogenic | 0.871 | pathogenic | -0.852 | Destabilizing | 0.992 | D | 0.837 | deleterious | None | None | None | None | N |
I/K | 0.7109 | likely_pathogenic | 0.7816 | pathogenic | -0.975 | Destabilizing | 0.919 | D | 0.809 | deleterious | None | None | None | None | N |
I/L | 0.1537 | likely_benign | 0.1819 | benign | -0.684 | Destabilizing | 0.002 | N | 0.19 | neutral | N | 0.459505069 | None | None | N |
I/M | 0.1528 | likely_benign | 0.1955 | benign | -0.559 | Destabilizing | 0.808 | D | 0.603 | neutral | N | 0.463334808 | None | None | N |
I/N | 0.6592 | likely_pathogenic | 0.7913 | pathogenic | -0.751 | Destabilizing | 0.963 | D | 0.837 | deleterious | N | 0.478073373 | None | None | N |
I/P | 0.8715 | likely_pathogenic | 0.9036 | pathogenic | -0.891 | Destabilizing | 0.972 | D | 0.833 | deleterious | None | None | None | None | N |
I/Q | 0.7216 | likely_pathogenic | 0.8112 | pathogenic | -0.939 | Destabilizing | 0.972 | D | 0.833 | deleterious | None | None | None | None | N |
I/R | 0.6255 | likely_pathogenic | 0.6845 | pathogenic | -0.357 | Destabilizing | 0.919 | D | 0.835 | deleterious | None | None | None | None | N |
I/S | 0.6367 | likely_pathogenic | 0.7672 | pathogenic | -1.341 | Destabilizing | 0.808 | D | 0.614 | neutral | N | 0.500949047 | None | None | N |
I/T | 0.3071 | likely_benign | 0.4171 | ambiguous | -1.242 | Destabilizing | 0.546 | D | 0.657 | prob.neutral | N | 0.437769068 | None | None | N |
I/V | 0.1114 | likely_benign | 0.1324 | benign | -0.891 | Destabilizing | 0.004 | N | 0.204 | neutral | N | 0.444055614 | None | None | N |
I/W | 0.8853 | likely_pathogenic | 0.9157 | pathogenic | -0.989 | Destabilizing | 0.992 | D | 0.753 | deleterious | None | None | None | None | N |
I/Y | 0.7829 | likely_pathogenic | 0.8195 | pathogenic | -0.785 | Destabilizing | 0.919 | D | 0.681 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.