Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17142 | 51649;51650;51651 | chr2:178610102;178610101;178610100 | chr2:179474829;179474828;179474827 |
N2AB | 15501 | 46726;46727;46728 | chr2:178610102;178610101;178610100 | chr2:179474829;179474828;179474827 |
N2A | 14574 | 43945;43946;43947 | chr2:178610102;178610101;178610100 | chr2:179474829;179474828;179474827 |
N2B | 8077 | 24454;24455;24456 | chr2:178610102;178610101;178610100 | chr2:179474829;179474828;179474827 |
Novex-1 | 8202 | 24829;24830;24831 | chr2:178610102;178610101;178610100 | chr2:179474829;179474828;179474827 |
Novex-2 | 8269 | 25030;25031;25032 | chr2:178610102;178610101;178610100 | chr2:179474829;179474828;179474827 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/K | None | None | 0.278 | N | 0.297 | 0.101 | 0.162503812791 | gnomAD-4.0.0 | 6.84643E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99836E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/A | 0.2278 | likely_benign | 0.2293 | benign | -0.446 | Destabilizing | 0.505 | D | 0.235 | neutral | None | None | None | None | N |
Q/C | 0.7596 | likely_pathogenic | 0.7285 | pathogenic | 0.205 | Stabilizing | 0.995 | D | 0.569 | neutral | None | None | None | None | N |
Q/D | 0.6918 | likely_pathogenic | 0.628 | pathogenic | -0.413 | Destabilizing | 0.338 | N | 0.244 | neutral | None | None | None | None | N |
Q/E | 0.0974 | likely_benign | 0.0899 | benign | -0.381 | Destabilizing | 0.001 | N | 0.103 | neutral | N | 0.380793569 | None | None | N |
Q/F | 0.8543 | likely_pathogenic | 0.8183 | pathogenic | -0.372 | Destabilizing | 0.982 | D | 0.512 | neutral | None | None | None | None | N |
Q/G | 0.4071 | ambiguous | 0.3664 | ambiguous | -0.74 | Destabilizing | 0.712 | D | 0.371 | neutral | None | None | None | None | N |
Q/H | 0.4371 | ambiguous | 0.395 | ambiguous | -0.798 | Destabilizing | 0.93 | D | 0.291 | neutral | N | 0.497140737 | None | None | N |
Q/I | 0.4738 | ambiguous | 0.4521 | ambiguous | 0.271 | Stabilizing | 0.946 | D | 0.611 | neutral | None | None | None | None | N |
Q/K | 0.2344 | likely_benign | 0.1624 | benign | -0.246 | Destabilizing | 0.278 | N | 0.297 | neutral | N | 0.359786366 | None | None | N |
Q/L | 0.2256 | likely_benign | 0.2005 | benign | 0.271 | Stabilizing | 0.651 | D | 0.337 | neutral | N | 0.43684164 | None | None | N |
Q/M | 0.3777 | ambiguous | 0.39 | ambiguous | 0.771 | Stabilizing | 0.982 | D | 0.282 | neutral | None | None | None | None | N |
Q/N | 0.4571 | ambiguous | 0.444 | ambiguous | -0.621 | Destabilizing | 0.712 | D | 0.239 | neutral | None | None | None | None | N |
Q/P | 0.899 | likely_pathogenic | 0.8247 | pathogenic | 0.063 | Stabilizing | 0.791 | D | 0.409 | neutral | N | 0.443303466 | None | None | N |
Q/R | 0.2541 | likely_benign | 0.1772 | benign | -0.169 | Destabilizing | 0.651 | D | 0.385 | neutral | N | 0.36804049 | None | None | N |
Q/S | 0.2538 | likely_benign | 0.2712 | benign | -0.644 | Destabilizing | 0.505 | D | 0.221 | neutral | None | None | None | None | N |
Q/T | 0.2096 | likely_benign | 0.2204 | benign | -0.437 | Destabilizing | 0.712 | D | 0.296 | neutral | None | None | None | None | N |
Q/V | 0.2623 | likely_benign | 0.2638 | benign | 0.063 | Stabilizing | 0.834 | D | 0.394 | neutral | None | None | None | None | N |
Q/W | 0.8803 | likely_pathogenic | 0.8095 | pathogenic | -0.297 | Destabilizing | 0.995 | D | 0.555 | neutral | None | None | None | None | N |
Q/Y | 0.746 | likely_pathogenic | 0.6836 | pathogenic | -0.072 | Destabilizing | 0.982 | D | 0.46 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.