Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17155 | 51688;51689;51690 | chr2:178609960;178609959;178609958 | chr2:179474687;179474686;179474685 |
N2AB | 15514 | 46765;46766;46767 | chr2:178609960;178609959;178609958 | chr2:179474687;179474686;179474685 |
N2A | 14587 | 43984;43985;43986 | chr2:178609960;178609959;178609958 | chr2:179474687;179474686;179474685 |
N2B | 8090 | 24493;24494;24495 | chr2:178609960;178609959;178609958 | chr2:179474687;179474686;179474685 |
Novex-1 | 8215 | 24868;24869;24870 | chr2:178609960;178609959;178609958 | chr2:179474687;179474686;179474685 |
Novex-2 | 8282 | 25069;25070;25071 | chr2:178609960;178609959;178609958 | chr2:179474687;179474686;179474685 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/G | rs926188442 | None | 0.645 | N | 0.676 | 0.373 | 0.353974658523 | gnomAD-3.1.2 | 1.32E-05 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 9.57854E-04 |
E/G | rs926188442 | None | 0.645 | N | 0.676 | 0.373 | 0.353974658523 | gnomAD-4.0.0 | 1.31638E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 9.57854E-04 |
E/V | None | None | 0.864 | N | 0.753 | 0.393 | 0.414021929199 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2901 | likely_benign | 0.2511 | benign | -0.685 | Destabilizing | 0.477 | N | 0.58 | neutral | N | 0.47488274 | None | None | N |
E/C | 0.9323 | likely_pathogenic | 0.9128 | pathogenic | -0.36 | Destabilizing | 0.995 | D | 0.709 | prob.delet. | None | None | None | None | N |
E/D | 0.3073 | likely_benign | 0.2639 | benign | -0.773 | Destabilizing | 0.006 | N | 0.353 | neutral | N | 0.469722943 | None | None | N |
E/F | 0.8969 | likely_pathogenic | 0.8616 | pathogenic | -0.402 | Destabilizing | 0.995 | D | 0.776 | deleterious | None | None | None | None | N |
E/G | 0.5029 | ambiguous | 0.4503 | ambiguous | -0.969 | Destabilizing | 0.645 | D | 0.676 | prob.neutral | N | 0.483232069 | None | None | N |
E/H | 0.7337 | likely_pathogenic | 0.6746 | pathogenic | -0.518 | Destabilizing | 0.985 | D | 0.599 | neutral | None | None | None | None | N |
E/I | 0.5119 | ambiguous | 0.4494 | ambiguous | 0.063 | Stabilizing | 0.945 | D | 0.789 | deleterious | None | None | None | None | N |
E/K | 0.3943 | ambiguous | 0.3177 | benign | -0.507 | Destabilizing | 0.006 | N | 0.393 | neutral | N | 0.477208182 | None | None | N |
E/L | 0.6475 | likely_pathogenic | 0.5825 | pathogenic | 0.063 | Stabilizing | 0.894 | D | 0.762 | deleterious | None | None | None | None | N |
E/M | 0.6076 | likely_pathogenic | 0.5669 | pathogenic | 0.321 | Stabilizing | 0.995 | D | 0.752 | deleterious | None | None | None | None | N |
E/N | 0.5654 | likely_pathogenic | 0.4912 | ambiguous | -0.743 | Destabilizing | 0.809 | D | 0.598 | neutral | None | None | None | None | N |
E/P | 0.9937 | likely_pathogenic | 0.9908 | pathogenic | -0.165 | Destabilizing | 0.945 | D | 0.772 | deleterious | None | None | None | None | N |
E/Q | 0.2599 | likely_benign | 0.2219 | benign | -0.658 | Destabilizing | 0.761 | D | 0.551 | neutral | N | 0.496564734 | None | None | N |
E/R | 0.5533 | ambiguous | 0.4724 | ambiguous | -0.214 | Destabilizing | 0.809 | D | 0.584 | neutral | None | None | None | None | N |
E/S | 0.409 | ambiguous | 0.3577 | ambiguous | -0.99 | Destabilizing | 0.547 | D | 0.483 | neutral | None | None | None | None | N |
E/T | 0.347 | ambiguous | 0.3052 | benign | -0.773 | Destabilizing | 0.894 | D | 0.722 | prob.delet. | None | None | None | None | N |
E/V | 0.3074 | likely_benign | 0.2639 | benign | -0.165 | Destabilizing | 0.864 | D | 0.753 | deleterious | N | 0.49167899 | None | None | N |
E/W | 0.9754 | likely_pathogenic | 0.9656 | pathogenic | -0.24 | Destabilizing | 0.995 | D | 0.691 | prob.neutral | None | None | None | None | N |
E/Y | 0.8689 | likely_pathogenic | 0.8195 | pathogenic | -0.198 | Destabilizing | 0.981 | D | 0.786 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.