Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17159 | 51700;51701;51702 | chr2:178609948;178609947;178609946 | chr2:179474675;179474674;179474673 |
N2AB | 15518 | 46777;46778;46779 | chr2:178609948;178609947;178609946 | chr2:179474675;179474674;179474673 |
N2A | 14591 | 43996;43997;43998 | chr2:178609948;178609947;178609946 | chr2:179474675;179474674;179474673 |
N2B | 8094 | 24505;24506;24507 | chr2:178609948;178609947;178609946 | chr2:179474675;179474674;179474673 |
Novex-1 | 8219 | 24880;24881;24882 | chr2:178609948;178609947;178609946 | chr2:179474675;179474674;179474673 |
Novex-2 | 8286 | 25081;25082;25083 | chr2:178609948;178609947;178609946 | chr2:179474675;179474674;179474673 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/L | None | None | 0.025 | N | 0.427 | 0.3 | 0.470318359215 | gnomAD-4.0.0 | 3.1868E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.72443E-06 | 0 | 0 |
P/T | None | None | 0.967 | N | 0.581 | 0.294 | 0.334161072951 | gnomAD-4.0.0 | 1.59351E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86229E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.1734 | likely_benign | 0.2004 | benign | -1.022 | Destabilizing | 0.805 | D | 0.477 | neutral | N | 0.440095376 | None | None | N |
P/C | 0.705 | likely_pathogenic | 0.7514 | pathogenic | -0.713 | Destabilizing | 0.999 | D | 0.711 | prob.delet. | None | None | None | None | N |
P/D | 0.9302 | likely_pathogenic | 0.9348 | pathogenic | -1.119 | Destabilizing | 0.996 | D | 0.64 | neutral | None | None | None | None | N |
P/E | 0.7255 | likely_pathogenic | 0.7389 | pathogenic | -1.224 | Destabilizing | 0.987 | D | 0.617 | neutral | None | None | None | None | N |
P/F | 0.8777 | likely_pathogenic | 0.8831 | pathogenic | -1.305 | Destabilizing | 0.975 | D | 0.726 | prob.delet. | None | None | None | None | N |
P/G | 0.7302 | likely_pathogenic | 0.7588 | pathogenic | -1.198 | Destabilizing | 0.987 | D | 0.597 | neutral | None | None | None | None | N |
P/H | 0.6061 | likely_pathogenic | 0.6221 | pathogenic | -0.844 | Destabilizing | 0.999 | D | 0.655 | neutral | N | 0.46930487 | None | None | N |
P/I | 0.4184 | ambiguous | 0.4528 | ambiguous | -0.682 | Destabilizing | 0.653 | D | 0.638 | neutral | None | None | None | None | N |
P/K | 0.6258 | likely_pathogenic | 0.6716 | pathogenic | -0.726 | Destabilizing | 0.987 | D | 0.607 | neutral | None | None | None | None | N |
P/L | 0.304 | likely_benign | 0.3462 | ambiguous | -0.682 | Destabilizing | 0.025 | N | 0.427 | neutral | N | 0.454928756 | None | None | N |
P/M | 0.5706 | likely_pathogenic | 0.6157 | pathogenic | -0.357 | Destabilizing | 0.993 | D | 0.667 | neutral | None | None | None | None | N |
P/N | 0.8135 | likely_pathogenic | 0.8288 | pathogenic | -0.461 | Destabilizing | 0.996 | D | 0.678 | prob.neutral | None | None | None | None | N |
P/Q | 0.4561 | ambiguous | 0.481 | ambiguous | -0.798 | Destabilizing | 0.996 | D | 0.642 | neutral | None | None | None | None | N |
P/R | 0.4546 | ambiguous | 0.4824 | ambiguous | -0.145 | Destabilizing | 0.983 | D | 0.679 | prob.neutral | N | 0.468820773 | None | None | N |
P/S | 0.4251 | ambiguous | 0.4645 | ambiguous | -0.817 | Destabilizing | 0.967 | D | 0.588 | neutral | N | 0.463876313 | None | None | N |
P/T | 0.2316 | likely_benign | 0.2752 | benign | -0.831 | Destabilizing | 0.967 | D | 0.581 | neutral | N | 0.410292544 | None | None | N |
P/V | 0.279 | likely_benign | 0.3138 | benign | -0.761 | Destabilizing | 0.073 | N | 0.329 | neutral | None | None | None | None | N |
P/W | 0.9508 | likely_pathogenic | 0.9489 | pathogenic | -1.387 | Destabilizing | 0.999 | D | 0.695 | prob.neutral | None | None | None | None | N |
P/Y | 0.8719 | likely_pathogenic | 0.8718 | pathogenic | -1.066 | Destabilizing | 0.987 | D | 0.725 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.