Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17162 | 51709;51710;51711 | chr2:178609939;178609938;178609937 | chr2:179474666;179474665;179474664 |
N2AB | 15521 | 46786;46787;46788 | chr2:178609939;178609938;178609937 | chr2:179474666;179474665;179474664 |
N2A | 14594 | 44005;44006;44007 | chr2:178609939;178609938;178609937 | chr2:179474666;179474665;179474664 |
N2B | 8097 | 24514;24515;24516 | chr2:178609939;178609938;178609937 | chr2:179474666;179474665;179474664 |
Novex-1 | 8222 | 24889;24890;24891 | chr2:178609939;178609938;178609937 | chr2:179474666;179474665;179474664 |
Novex-2 | 8289 | 25090;25091;25092 | chr2:178609939;178609938;178609937 | chr2:179474666;179474665;179474664 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/G | None | None | 0.012 | N | 0.259 | 0.101 | 0.254761474806 | gnomAD-4.0.0 | 1.59316E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86195E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.105 | likely_benign | 0.1024 | benign | -0.681 | Destabilizing | 0.005 | N | 0.235 | neutral | N | 0.486465171 | None | None | N |
E/C | 0.6955 | likely_pathogenic | 0.6734 | pathogenic | -0.042 | Destabilizing | 0.864 | D | 0.258 | neutral | None | None | None | None | N |
E/D | 0.115 | likely_benign | 0.1125 | benign | -0.582 | Destabilizing | 0.012 | N | 0.235 | neutral | N | 0.394053655 | None | None | N |
E/F | 0.6539 | likely_pathogenic | 0.6338 | pathogenic | -0.601 | Destabilizing | 0.628 | D | 0.304 | neutral | None | None | None | None | N |
E/G | 0.1192 | likely_benign | 0.1113 | benign | -0.92 | Destabilizing | 0.012 | N | 0.259 | neutral | N | 0.458374492 | None | None | N |
E/H | 0.2636 | likely_benign | 0.2597 | benign | -0.695 | Destabilizing | 0.214 | N | 0.312 | neutral | None | None | None | None | N |
E/I | 0.3188 | likely_benign | 0.3139 | benign | -0.067 | Destabilizing | 0.356 | N | 0.378 | neutral | None | None | None | None | N |
E/K | 0.0726 | likely_benign | 0.0717 | benign | 0.078 | Stabilizing | None | N | 0.056 | neutral | N | 0.442578321 | None | None | N |
E/L | 0.2839 | likely_benign | 0.2727 | benign | -0.067 | Destabilizing | 0.072 | N | 0.361 | neutral | None | None | None | None | N |
E/M | 0.312 | likely_benign | 0.308 | benign | 0.313 | Stabilizing | 0.628 | D | 0.279 | neutral | None | None | None | None | N |
E/N | 0.1321 | likely_benign | 0.1354 | benign | -0.231 | Destabilizing | None | N | 0.067 | neutral | None | None | None | None | N |
E/P | 0.8182 | likely_pathogenic | 0.7675 | pathogenic | -0.251 | Destabilizing | 0.136 | N | 0.405 | neutral | None | None | None | None | N |
E/Q | 0.089 | likely_benign | 0.0894 | benign | -0.203 | Destabilizing | 0.029 | N | 0.257 | neutral | N | 0.475421458 | None | None | N |
E/R | 0.1339 | likely_benign | 0.1285 | benign | 0.181 | Stabilizing | 0.016 | N | 0.215 | neutral | None | None | None | None | N |
E/S | 0.1114 | likely_benign | 0.1126 | benign | -0.434 | Destabilizing | 0.001 | N | 0.083 | neutral | None | None | None | None | N |
E/T | 0.1169 | likely_benign | 0.1179 | benign | -0.24 | Destabilizing | 0.016 | N | 0.321 | neutral | None | None | None | None | N |
E/V | 0.2012 | likely_benign | 0.1933 | benign | -0.251 | Destabilizing | 0.055 | N | 0.364 | neutral | N | 0.518961591 | None | None | N |
E/W | 0.823 | likely_pathogenic | 0.7967 | pathogenic | -0.429 | Destabilizing | 0.864 | D | 0.301 | neutral | None | None | None | None | N |
E/Y | 0.4872 | ambiguous | 0.4581 | ambiguous | -0.354 | Destabilizing | 0.628 | D | 0.297 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.