Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17166 | 51721;51722;51723 | chr2:178609927;178609926;178609925 | chr2:179474654;179474653;179474652 |
N2AB | 15525 | 46798;46799;46800 | chr2:178609927;178609926;178609925 | chr2:179474654;179474653;179474652 |
N2A | 14598 | 44017;44018;44019 | chr2:178609927;178609926;178609925 | chr2:179474654;179474653;179474652 |
N2B | 8101 | 24526;24527;24528 | chr2:178609927;178609926;178609925 | chr2:179474654;179474653;179474652 |
Novex-1 | 8226 | 24901;24902;24903 | chr2:178609927;178609926;178609925 | chr2:179474654;179474653;179474652 |
Novex-2 | 8293 | 25102;25103;25104 | chr2:178609927;178609926;178609925 | chr2:179474654;179474653;179474652 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/V | None | None | 0.018 | N | 0.355 | 0.086 | 0.437100570223 | gnomAD-4.0.0 | 1.59299E-06 | None | None | None | None | N | None | 0 | 2.28739E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.971 | likely_pathogenic | 0.9704 | pathogenic | -2.79 | Highly Destabilizing | 0.207 | N | 0.584 | neutral | None | None | None | None | N |
I/C | 0.9734 | likely_pathogenic | 0.9727 | pathogenic | -2.049 | Highly Destabilizing | 0.932 | D | 0.741 | deleterious | None | None | None | None | N |
I/D | 0.9998 | likely_pathogenic | 0.9998 | pathogenic | -3.57 | Highly Destabilizing | 0.932 | D | 0.811 | deleterious | None | None | None | None | N |
I/E | 0.9991 | likely_pathogenic | 0.999 | pathogenic | -3.261 | Highly Destabilizing | 0.818 | D | 0.78 | deleterious | None | None | None | None | N |
I/F | 0.7983 | likely_pathogenic | 0.8006 | pathogenic | -1.579 | Destabilizing | 0.193 | N | 0.587 | neutral | N | 0.521308463 | None | None | N |
I/G | 0.998 | likely_pathogenic | 0.9978 | pathogenic | -3.368 | Highly Destabilizing | 0.818 | D | 0.774 | deleterious | None | None | None | None | N |
I/H | 0.9988 | likely_pathogenic | 0.9988 | pathogenic | -3.115 | Highly Destabilizing | 0.981 | D | 0.823 | deleterious | None | None | None | None | N |
I/K | 0.9979 | likely_pathogenic | 0.9979 | pathogenic | -2.14 | Highly Destabilizing | 0.563 | D | 0.777 | deleterious | None | None | None | None | N |
I/L | 0.1742 | likely_benign | 0.2005 | benign | -1.046 | Destabilizing | None | N | 0.181 | neutral | N | 0.326470721 | None | None | N |
I/M | 0.3918 | ambiguous | 0.4139 | ambiguous | -1.303 | Destabilizing | 0.627 | D | 0.629 | neutral | N | 0.493911218 | None | None | N |
I/N | 0.9975 | likely_pathogenic | 0.9971 | pathogenic | -2.816 | Highly Destabilizing | 0.912 | D | 0.822 | deleterious | N | 0.491563408 | None | None | N |
I/P | 0.9988 | likely_pathogenic | 0.9983 | pathogenic | -1.62 | Destabilizing | 0.932 | D | 0.821 | deleterious | None | None | None | None | N |
I/Q | 0.9981 | likely_pathogenic | 0.998 | pathogenic | -2.473 | Highly Destabilizing | 0.932 | D | 0.823 | deleterious | None | None | None | None | N |
I/R | 0.9968 | likely_pathogenic | 0.9966 | pathogenic | -2.165 | Highly Destabilizing | 0.818 | D | 0.806 | deleterious | None | None | None | None | N |
I/S | 0.9959 | likely_pathogenic | 0.9956 | pathogenic | -3.318 | Highly Destabilizing | 0.492 | N | 0.703 | prob.neutral | N | 0.491309918 | None | None | N |
I/T | 0.9856 | likely_pathogenic | 0.9856 | pathogenic | -2.86 | Highly Destabilizing | 0.324 | N | 0.647 | neutral | N | 0.491309918 | None | None | N |
I/V | 0.1098 | likely_benign | 0.108 | benign | -1.62 | Destabilizing | 0.018 | N | 0.355 | neutral | N | 0.400320693 | None | None | N |
I/W | 0.9977 | likely_pathogenic | 0.9978 | pathogenic | -2.053 | Highly Destabilizing | 0.981 | D | 0.816 | deleterious | None | None | None | None | N |
I/Y | 0.991 | likely_pathogenic | 0.9909 | pathogenic | -1.865 | Destabilizing | 0.818 | D | 0.713 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.