Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17169 | 51730;51731;51732 | chr2:178609918;178609917;178609916 | chr2:179474645;179474644;179474643 |
N2AB | 15528 | 46807;46808;46809 | chr2:178609918;178609917;178609916 | chr2:179474645;179474644;179474643 |
N2A | 14601 | 44026;44027;44028 | chr2:178609918;178609917;178609916 | chr2:179474645;179474644;179474643 |
N2B | 8104 | 24535;24536;24537 | chr2:178609918;178609917;178609916 | chr2:179474645;179474644;179474643 |
Novex-1 | 8229 | 24910;24911;24912 | chr2:178609918;178609917;178609916 | chr2:179474645;179474644;179474643 |
Novex-2 | 8296 | 25111;25112;25113 | chr2:178609918;178609917;178609916 | chr2:179474645;179474644;179474643 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/M | rs1167283297 | None | 1.0 | N | 0.788 | 0.512 | 0.442363741745 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
K/M | rs1167283297 | None | 1.0 | N | 0.788 | 0.512 | 0.442363741745 | gnomAD-4.0.0 | 2.56469E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 4.79148E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.8557 | likely_pathogenic | 0.7848 | pathogenic | -0.339 | Destabilizing | 0.999 | D | 0.713 | prob.delet. | None | None | None | None | I |
K/C | 0.9241 | likely_pathogenic | 0.8905 | pathogenic | -0.437 | Destabilizing | 1.0 | D | 0.868 | deleterious | None | None | None | None | I |
K/D | 0.9142 | likely_pathogenic | 0.8628 | pathogenic | -0.166 | Destabilizing | 1.0 | D | 0.812 | deleterious | None | None | None | None | I |
K/E | 0.6456 | likely_pathogenic | 0.5393 | ambiguous | -0.075 | Destabilizing | 0.999 | D | 0.562 | neutral | N | 0.484886303 | None | None | I |
K/F | 0.963 | likely_pathogenic | 0.9413 | pathogenic | -0.087 | Destabilizing | 1.0 | D | 0.867 | deleterious | None | None | None | None | I |
K/G | 0.8931 | likely_pathogenic | 0.8365 | pathogenic | -0.665 | Destabilizing | 1.0 | D | 0.774 | deleterious | None | None | None | None | I |
K/H | 0.6041 | likely_pathogenic | 0.54 | ambiguous | -0.9 | Destabilizing | 1.0 | D | 0.793 | deleterious | None | None | None | None | I |
K/I | 0.7632 | likely_pathogenic | 0.7148 | pathogenic | 0.485 | Stabilizing | 1.0 | D | 0.877 | deleterious | None | None | None | None | I |
K/L | 0.6995 | likely_pathogenic | 0.638 | pathogenic | 0.485 | Stabilizing | 1.0 | D | 0.774 | deleterious | None | None | None | None | I |
K/M | 0.5715 | likely_pathogenic | 0.5032 | ambiguous | 0.134 | Stabilizing | 1.0 | D | 0.788 | deleterious | N | 0.471777313 | None | None | I |
K/N | 0.7478 | likely_pathogenic | 0.6681 | pathogenic | -0.36 | Destabilizing | 1.0 | D | 0.707 | prob.neutral | N | 0.511035541 | None | None | I |
K/P | 0.9941 | likely_pathogenic | 0.9888 | pathogenic | 0.24 | Stabilizing | 1.0 | D | 0.824 | deleterious | None | None | None | None | I |
K/Q | 0.3355 | likely_benign | 0.2767 | benign | -0.387 | Destabilizing | 1.0 | D | 0.675 | prob.neutral | N | 0.487523964 | None | None | I |
K/R | 0.1538 | likely_benign | 0.1379 | benign | -0.498 | Destabilizing | 0.999 | D | 0.513 | neutral | N | 0.476365607 | None | None | I |
K/S | 0.85 | likely_pathogenic | 0.7889 | pathogenic | -0.865 | Destabilizing | 0.999 | D | 0.635 | neutral | None | None | None | None | I |
K/T | 0.6294 | likely_pathogenic | 0.5586 | ambiguous | -0.586 | Destabilizing | 1.0 | D | 0.781 | deleterious | N | 0.473111871 | None | None | I |
K/V | 0.7423 | likely_pathogenic | 0.6965 | pathogenic | 0.24 | Stabilizing | 1.0 | D | 0.811 | deleterious | None | None | None | None | I |
K/W | 0.9612 | likely_pathogenic | 0.9392 | pathogenic | -0.058 | Destabilizing | 1.0 | D | 0.869 | deleterious | None | None | None | None | I |
K/Y | 0.885 | likely_pathogenic | 0.8345 | pathogenic | 0.222 | Stabilizing | 1.0 | D | 0.841 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.