Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17187 | 51784;51785;51786 | chr2:178609864;178609863;178609862 | chr2:179474591;179474590;179474589 |
N2AB | 15546 | 46861;46862;46863 | chr2:178609864;178609863;178609862 | chr2:179474591;179474590;179474589 |
N2A | 14619 | 44080;44081;44082 | chr2:178609864;178609863;178609862 | chr2:179474591;179474590;179474589 |
N2B | 8122 | 24589;24590;24591 | chr2:178609864;178609863;178609862 | chr2:179474591;179474590;179474589 |
Novex-1 | 8247 | 24964;24965;24966 | chr2:178609864;178609863;178609862 | chr2:179474591;179474590;179474589 |
Novex-2 | 8314 | 25165;25166;25167 | chr2:178609864;178609863;178609862 | chr2:179474591;179474590;179474589 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/M | None | None | 0.009 | N | 0.175 | 0.025 | 0.315609569513 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 0 |
I/T | None | None | 0.183 | N | 0.529 | 0.17 | 0.54848712621 | gnomAD-4.0.0 | 1.36893E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99794E-07 | 1.15972E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.3735 | ambiguous | 0.2947 | benign | -2.417 | Highly Destabilizing | 0.114 | N | 0.504 | neutral | None | None | None | None | N |
I/C | 0.7566 | likely_pathogenic | 0.6856 | pathogenic | -1.524 | Destabilizing | 0.94 | D | 0.613 | neutral | None | None | None | None | N |
I/D | 0.9545 | likely_pathogenic | 0.907 | pathogenic | -3.027 | Highly Destabilizing | 0.418 | N | 0.657 | neutral | None | None | None | None | N |
I/E | 0.7686 | likely_pathogenic | 0.6555 | pathogenic | -2.78 | Highly Destabilizing | 0.129 | N | 0.573 | neutral | None | None | None | None | N |
I/F | 0.3413 | ambiguous | 0.2653 | benign | -1.317 | Destabilizing | 0.213 | N | 0.499 | neutral | N | 0.426494147 | None | None | N |
I/G | 0.8362 | likely_pathogenic | 0.7452 | pathogenic | -2.937 | Highly Destabilizing | 0.593 | D | 0.622 | neutral | None | None | None | None | N |
I/H | 0.7925 | likely_pathogenic | 0.6865 | pathogenic | -2.555 | Highly Destabilizing | 0.836 | D | 0.643 | neutral | None | None | None | None | N |
I/K | 0.4692 | ambiguous | 0.3722 | ambiguous | -1.662 | Destabilizing | 0.129 | N | 0.575 | neutral | None | None | None | None | N |
I/L | 0.1562 | likely_benign | 0.123 | benign | -0.885 | Destabilizing | None | N | 0.093 | neutral | N | 0.452024523 | None | None | N |
I/M | 0.0884 | likely_benign | 0.0767 | benign | -0.961 | Destabilizing | 0.009 | N | 0.175 | neutral | N | 0.442290319 | None | None | N |
I/N | 0.6351 | likely_pathogenic | 0.4793 | ambiguous | -2.087 | Highly Destabilizing | 0.523 | D | 0.689 | prob.neutral | N | 0.457662416 | None | None | N |
I/P | 0.9879 | likely_pathogenic | 0.9773 | pathogenic | -1.382 | Destabilizing | 0.816 | D | 0.693 | prob.neutral | None | None | None | None | N |
I/Q | 0.5179 | ambiguous | 0.4163 | ambiguous | -1.892 | Destabilizing | 0.012 | N | 0.455 | neutral | None | None | None | None | N |
I/R | 0.4119 | ambiguous | 0.3131 | benign | -1.522 | Destabilizing | 0.418 | N | 0.645 | neutral | None | None | None | None | N |
I/S | 0.5404 | ambiguous | 0.4079 | ambiguous | -2.653 | Highly Destabilizing | 0.183 | N | 0.546 | neutral | N | 0.426126001 | None | None | N |
I/T | 0.2604 | likely_benign | 0.1956 | benign | -2.279 | Highly Destabilizing | 0.183 | N | 0.529 | neutral | N | 0.433785479 | None | None | N |
I/V | 0.1142 | likely_benign | 0.1009 | benign | -1.382 | Destabilizing | 0.021 | N | 0.369 | neutral | N | 0.501029192 | None | None | N |
I/W | 0.8983 | likely_pathogenic | 0.8562 | pathogenic | -1.804 | Destabilizing | 0.983 | D | 0.625 | neutral | None | None | None | None | N |
I/Y | 0.7271 | likely_pathogenic | 0.6268 | pathogenic | -1.523 | Destabilizing | 0.593 | D | 0.654 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.