Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17195 | 51808;51809;51810 | chr2:178609840;178609839;178609838 | chr2:179474567;179474566;179474565 |
N2AB | 15554 | 46885;46886;46887 | chr2:178609840;178609839;178609838 | chr2:179474567;179474566;179474565 |
N2A | 14627 | 44104;44105;44106 | chr2:178609840;178609839;178609838 | chr2:179474567;179474566;179474565 |
N2B | 8130 | 24613;24614;24615 | chr2:178609840;178609839;178609838 | chr2:179474567;179474566;179474565 |
Novex-1 | 8255 | 24988;24989;24990 | chr2:178609840;178609839;178609838 | chr2:179474567;179474566;179474565 |
Novex-2 | 8322 | 25189;25190;25191 | chr2:178609840;178609839;178609838 | chr2:179474567;179474566;179474565 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/N | None | None | 0.801 | N | 0.259 | 0.128 | 0.168933306366 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 6.33473E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.3379 | likely_benign | 0.3114 | benign | -0.629 | Destabilizing | 0.688 | D | 0.317 | neutral | None | None | None | None | N |
K/C | 0.6164 | likely_pathogenic | 0.5664 | pathogenic | -0.563 | Destabilizing | 0.998 | D | 0.299 | neutral | None | None | None | None | N |
K/D | 0.5901 | likely_pathogenic | 0.5599 | ambiguous | -0.408 | Destabilizing | 0.525 | D | 0.315 | neutral | None | None | None | None | N |
K/E | 0.1336 | likely_benign | 0.1254 | benign | -0.255 | Destabilizing | 0.002 | N | 0.125 | neutral | N | 0.412700918 | None | None | N |
K/F | 0.673 | likely_pathogenic | 0.637 | pathogenic | -0.028 | Destabilizing | 0.991 | D | 0.287 | neutral | None | None | None | None | N |
K/G | 0.5055 | ambiguous | 0.4722 | ambiguous | -1.031 | Destabilizing | 0.842 | D | 0.3 | neutral | None | None | None | None | N |
K/H | 0.2455 | likely_benign | 0.2237 | benign | -1.221 | Destabilizing | 0.974 | D | 0.31 | neutral | None | None | None | None | N |
K/I | 0.1977 | likely_benign | 0.188 | benign | 0.439 | Stabilizing | 0.974 | D | 0.31 | neutral | None | None | None | None | N |
K/L | 0.2842 | likely_benign | 0.2708 | benign | 0.439 | Stabilizing | 0.842 | D | 0.311 | neutral | None | None | None | None | N |
K/M | 0.187 | likely_benign | 0.1773 | benign | 0.13 | Stabilizing | 0.989 | D | 0.31 | neutral | N | 0.469420992 | None | None | N |
K/N | 0.3777 | ambiguous | 0.3605 | ambiguous | -0.749 | Destabilizing | 0.801 | D | 0.259 | neutral | N | 0.501375908 | None | None | N |
K/P | 0.9574 | likely_pathogenic | 0.9556 | pathogenic | 0.111 | Stabilizing | 0.915 | D | 0.322 | neutral | None | None | None | None | N |
K/Q | 0.0923 | likely_benign | 0.0852 | benign | -0.668 | Destabilizing | 0.136 | N | 0.124 | neutral | N | 0.413391564 | None | None | N |
K/R | 0.0928 | likely_benign | 0.0893 | benign | -0.81 | Destabilizing | 0.625 | D | 0.314 | neutral | N | 0.444869264 | None | None | N |
K/S | 0.3622 | ambiguous | 0.34 | ambiguous | -1.283 | Destabilizing | 0.688 | D | 0.289 | neutral | None | None | None | None | N |
K/T | 0.1399 | likely_benign | 0.1313 | benign | -0.921 | Destabilizing | 0.801 | D | 0.301 | neutral | N | 0.44352247 | None | None | N |
K/V | 0.175 | likely_benign | 0.165 | benign | 0.111 | Stabilizing | 0.915 | D | 0.289 | neutral | None | None | None | None | N |
K/W | 0.7302 | likely_pathogenic | 0.7023 | pathogenic | 0.014 | Stabilizing | 0.998 | D | 0.309 | neutral | None | None | None | None | N |
K/Y | 0.5834 | likely_pathogenic | 0.5445 | ambiguous | 0.255 | Stabilizing | 0.991 | D | 0.297 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.